Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
URB1O60287 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.5■□□□□ 0.71
URB1O60287 CDV3P1-201ENST00000471403 739 ntBASIC19.5■□□□□ 0.71
URB1O60287 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.5■□□□□ 0.71
URB1O60287 AC120498.8-201ENST00000614275 531 ntBASIC19.5■□□□□ 0.71
URB1O60287 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.5■□□□□ 0.71
URB1O60287 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.49■□□□□ 0.71
URB1O60287 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.49■□□□□ 0.71
URB1O60287 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.49■□□□□ 0.71
URB1O60287 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.49■□□□□ 0.71
URB1O60287 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.49■□□□□ 0.71
URB1O60287 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.49■□□□□ 0.71
URB1O60287 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.49■□□□□ 0.71
URB1O60287 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.49■□□□□ 0.71
URB1O60287 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.49■□□□□ 0.71
URB1O60287 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
URB1O60287 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
URB1O60287 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.49■□□□□ 0.71
URB1O60287 AC091799.1-201ENST00000422823 811 ntBASIC19.49■□□□□ 0.71
URB1O60287 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.49■□□□□ 0.71
URB1O60287 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.49■□□□□ 0.71
URB1O60287 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
URB1O60287 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.49■□□□□ 0.71
URB1O60287 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.48■□□□□ 0.71
URB1O60287 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
URB1O60287 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
URB1O60287 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 AP003071.4-201ENST00000562276 1284 ntBASIC19.48■□□□□ 0.71
URB1O60287 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.48■□□□□ 0.71
URB1O60287 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
URB1O60287 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
URB1O60287 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
URB1O60287 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
URB1O60287 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.48■□□□□ 0.71
URB1O60287 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
URB1O60287 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.48■□□□□ 0.71
URB1O60287 PRKY-204ENST00000533551 1019 ntBASIC19.48■□□□□ 0.71
URB1O60287 AC110285.5-201ENST00000611501 352 ntBASIC19.48■□□□□ 0.71
URB1O60287 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.47■□□□□ 0.71
URB1O60287 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.47■□□□□ 0.71
URB1O60287 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
URB1O60287 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
URB1O60287 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
URB1O60287 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
URB1O60287 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
URB1O60287 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.46■□□□□ 0.71
URB1O60287 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.46■□□□□ 0.71
URB1O60287 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
URB1O60287 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.46■□□□□ 0.71
URB1O60287 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.46■□□□□ 0.71
URB1O60287 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
URB1O60287 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.46■□□□□ 0.71
URB1O60287 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.46■□□□□ 0.71
URB1O60287 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
URB1O60287 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
URB1O60287 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
URB1O60287 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.46■□□□□ 0.71
URB1O60287 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.7
URB1O60287 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms