Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.67■□□□□ 0.74
RTCAO00442 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.67■□□□□ 0.74
RTCAO00442 AL157384.1-201ENST00000445995 2473 ntBASIC19.67■□□□□ 0.74
RTCAO00442 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.67■□□□□ 0.74
RTCAO00442 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTCAO00442 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTCAO00442 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTCAO00442 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTCAO00442 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.67■□□□□ 0.74
RTCAO00442 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.67■□□□□ 0.74
RTCAO00442 AC091799.1-201ENST00000422823 811 ntBASIC19.67■□□□□ 0.74
RTCAO00442 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RTCAO00442 AC006015.1-201ENST00000429970 570 ntBASIC19.67■□□□□ 0.74
RTCAO00442 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.67■□□□□ 0.74
RTCAO00442 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.67■□□□□ 0.74
RTCAO00442 MFSD11-216ENST00000590393 1141 ntBASIC19.67■□□□□ 0.74
RTCAO00442 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTCAO00442 IKBKGP1-201ENST00000612193 1073 ntBASIC19.67■□□□□ 0.74
RTCAO00442 AC011767.1-201ENST00000617410 1153 ntBASIC19.67■□□□□ 0.74
RTCAO00442 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTCAO00442 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTCAO00442 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.67■□□□□ 0.74
RTCAO00442 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTCAO00442 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
RTCAO00442 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTCAO00442 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTCAO00442 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTCAO00442 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTCAO00442 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RTCAO00442 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RTCAO00442 AC011484.1-201ENST00000377652 1995 ntBASIC19.66■□□□□ 0.74
RTCAO00442 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTCAO00442 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTCAO00442 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.66■□□□□ 0.74
RTCAO00442 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTCAO00442 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RTCAO00442 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.66■□□□□ 0.74
RTCAO00442 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.66■□□□□ 0.74
RTCAO00442 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.66■□□□□ 0.74
RTCAO00442 AC010536.3-201ENST00000620306 533 ntBASIC19.66■□□□□ 0.74
RTCAO00442 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTCAO00442 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTCAO00442 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTCAO00442 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTCAO00442 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTCAO00442 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.65■□□□□ 0.74
RTCAO00442 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
RTCAO00442 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTCAO00442 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTCAO00442 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTCAO00442 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.65■□□□□ 0.74
RTCAO00442 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.65■□□□□ 0.74
RTCAO00442 KRT18P11-201ENST00000435214 1283 ntBASIC19.65■□□□□ 0.74
RTCAO00442 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RTCAO00442 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.65■□□□□ 0.74
RTCAO00442 AC243732.1-201ENST00000612648 864 ntBASIC19.65■□□□□ 0.74
RTCAO00442 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTCAO00442 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.65■□□□□ 0.74
RTCAO00442 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.65■□□□□ 0.74
RTCAO00442 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTCAO00442 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTCAO00442 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.64■□□□□ 0.74
RTCAO00442 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTCAO00442 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RTCAO00442 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTCAO00442 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.64■□□□□ 0.73
RTCAO00442 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.64■□□□□ 0.73
RTCAO00442 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.64■□□□□ 0.73
RTCAO00442 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTCAO00442 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTCAO00442 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RTCAO00442 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.64■□□□□ 0.73
RTCAO00442 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.64■□□□□ 0.73
RTCAO00442 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.64■□□□□ 0.73
RTCAO00442 AC092437.1-201ENST00000624794 1048 ntBASIC19.64■□□□□ 0.73
RTCAO00442 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTCAO00442 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTCAO00442 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTCAO00442 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTCAO00442 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RTCAO00442 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.63■□□□□ 0.73
RTCAO00442 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RTCAO00442 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RTCAO00442 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
RTCAO00442 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 TERF1P5-201ENST00000477545 1207 ntBASIC19.63■□□□□ 0.73
RTCAO00442 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.63■□□□□ 0.73
RTCAO00442 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.63■□□□□ 0.73
RTCAO00442 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
RTCAO00442 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RTCAO00442 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms