Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM235A6NFC5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM235A6NFC5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 BX005040.4-201ENST00000637145 1518 ntBASIC17.55■□□□□ 0.4
TMEM235A6NFC5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM235A6NFC5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TMEM235A6NFC5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms