Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 AC092368.3-202ENST00000574180 1591 ntBASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3BA6NDS4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 PNMA6B-201ENST00000538162 1200 ntBASIC21■□□□□ 0.95
TBC1D3BA6NDS4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3BA6NDS4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 AC008403.3-201ENST00000598924 454 ntBASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D3BA6NDS4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 AC012676.1-201ENST00000574705 1949 ntBASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 UNC93B4-201ENST00000505679 747 ntBASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 AC105020.6-201ENST00000621523 1217 ntBASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D3BA6NDS4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TBC1D3BA6NDS4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms