Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV3S1A0A5B6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 SMUG1P1-201ENST00000590640 811 ntBASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV3S1A0A5B6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV3S1A0A5B6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.29■□□□□ 0.68
TCRBV3S1A0A5B6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 UNC93B8-201ENST00000511903 705 ntBASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 AC092171.4-201ENST00000609130 632 ntBASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV3S1A0A5B6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV3S1A0A5B6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV3S1A0A5B6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TCRBV3S1A0A5B6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV3S1A0A5B6 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV3S1A0A5B6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV3S1A0A5B6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV3S1A0A5B6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV3S1A0A5B6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV3S1A0A5B6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV3S1A0A5B6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV3S1A0A5B6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
TCRBV3S1A0A5B6 SYT6-210ENST00000641643 1587 ntBASIC19.27■□□□□ 0.67
TCRBV3S1A0A5B6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV3S1A0A5B6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV3S1A0A5B6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms