Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FAM166B-207ENST00000639789 651 ntTSL 2 BASIC8.74□□□□□ -1.01
P04436 ZNF177-201ENST00000343499 1835 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 IFT122-206ENST00000440957 4007 ntTSL 2 BASIC8.74□□□□□ -1.01
P04436 ANTXR2-201ENST00000307333 1473 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC8.74□□□□□ -1.01
P04436 KIF9-202ENST00000335044 3357 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 AC138470.1-201ENST00000624638 1897 ntBASIC8.74□□□□□ -1.01
P04436 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 LYSMD1-201ENST00000368908 2479 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 RAB29-202ENST00000367139 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 SP100-202ENST00000340126 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 PAMR1-207ENST00000619888 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 NLRP12-204ENST00000391773 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 YWHAQP5-201ENST00000415616 1382 ntBASIC8.73□□□□□ -1.01
P04436 BECN1-202ENST00000438274 1569 ntTSL 2 BASIC8.73□□□□□ -1.01
P04436 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 MMP1-201ENST00000315274 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 SH2D4A-204ENST00000519207 1984 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 ZNRF3-AS1-201ENST00000325660 2170 ntTSL 2 BASIC8.73□□□□□ -1.01
P04436 CCNJL-208ENST00000541762 2965 ntTSL 5 BASIC8.73□□□□□ -1.01
P04436 ELF3-203ENST00000367284 3179 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 MOV10-201ENST00000357443 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 ANO1-209ENST00000531349 3552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 PKD1L2-202ENST00000337114 3427 ntTSL 5 BASIC8.73□□□□□ -1.01
P04436 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 MPV17-202ENST00000357186 2011 ntTSL 2 BASIC8.73□□□□□ -1.01
P04436 SPO11-202ENST00000371260 1608 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.01
P04436 SEPT10-205ENST00000415095 1605 ntTSL 5 BASIC8.73□□□□□ -1.01
P04436 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
P04436 RARB-201ENST00000330688 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 HHAT-209ENST00000545781 2864 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 THPO-201ENST00000204615 1855 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 NXPE2-201ENST00000389586 1873 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
P04436 FAM98B-203ENST00000491535 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 RAF1P1-201ENST00000508566 1696 ntBASIC8.73□□□□□ -1.01
P04436 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 ZMIZ2-203ENST00000413916 3773 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 USP35-201ENST00000526425 3770 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
P04436 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC8.73□□□□□ -1.01
P04436 N4BP2L1-204ENST00000380139 2994 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 IGHV1-58-201ENST00000390628 414 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
P04436 AL590133.1-201ENST00000412838 368 ntTSL 3 BASIC8.73□□□□□ -1.01
P04436 AC104170.1-202ENST00000426017 362 ntTSL 3 BASIC8.73□□□□□ -1.01
P04436 SMYD3-IT1-201ENST00000426929 361 ntTSL 2 BASIC8.73□□□□□ -1.01
P04436 AF130417.1-201ENST00000432412 478 ntTSL 3 BASIC8.73□□□□□ -1.01
P04436 FBXO36-IT1-201ENST00000432957 582 ntTSL 3 BASIC8.73□□□□□ -1.01
P04436 OR13C6P-201ENST00000433495 950 ntBASIC8.73□□□□□ -1.01
P04436 RPL12P44-201ENST00000442319 502 ntBASIC8.73□□□□□ -1.01
P04436 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC8.73□□□□□ -1.01
P04436 AC010982.1-201ENST00000450325 465 ntTSL 4 BASIC8.73□□□□□ -1.01
P04436 MRPS33-204ENST00000469351 744 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
P04436 LINC00498-201ENST00000504369 455 ntTSL 3 BASIC8.73□□□□□ -1.01
P04436 AL050327.1-201ENST00000525424 507 ntTSL 4 BASIC8.73□□□□□ -1.01
P04436 AC009996.1-201ENST00000558006 653 ntTSL 5 BASIC8.73□□□□□ -1.01
P04436 AC004706.1-201ENST00000576138 879 ntTSL 3 BASIC8.73□□□□□ -1.01
P04436 AC018761.3-201ENST00000590065 388 ntTSL 5 BASIC8.73□□□□□ -1.01
P04436 ZNF738-203ENST00000594245 1086 ntTSL 2 BASIC8.73□□□□□ -1.01
P04436 SQSTM1P1-201ENST00000603451 859 ntBASIC8.73□□□□□ -1.01
P04436 AC111188.3-201ENST00000604663 307 ntBASIC8.73□□□□□ -1.01
P04436 AC018648.1-201ENST00000608314 668 ntBASIC8.73□□□□□ -1.01
P04436 GRIA3-206ENST00000616590 784 ntTSL 2 BASIC8.73□□□□□ -1.01
P04436 AC105133.2-201ENST00000624158 461 ntBASIC8.73□□□□□ -1.01
P04436 KF456110.1-201ENST00000641105 385 ntBASIC8.73□□□□□ -1.01
P04436 LRTOMT-202ENST00000307198 3604 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
P04436 AC023078.6-201ENST00000525272 1718 ntBASIC8.73□□□□□ -1.01
P04436 TCF4-254ENST00000626584 1701 ntTSL 5 BASIC8.73□□□□□ -1.01
P04436 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 HARS-208ENST00000504366 3494 ntTSL 2 BASIC8.73□□□□□ -1.01
P04436 LINC01998-201ENST00000464673 1967 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 ZNF160-201ENST00000355147 1304 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 CDCA3-204ENST00000535406 1327 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
P04436 GRHL3-204ENST00000361548 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 NRG1-209ENST00000519301 1785 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
P04436 SEMA4A-201ENST00000355014 3137 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 FAM69A-203ENST00000613902 2468 ntTSL 4 BASIC8.73□□□□□ -1.01
P04436 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 LRRC4C-207ENST00000619527 2286 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
P04436 RAPGEFL1-201ENST00000264644 3429 ntTSL 5 BASIC8.73□□□□□ -1.01
P04436 LCLAT1-202ENST00000319406 2774 ntTSL 2 BASIC8.73□□□□□ -1.01
P04436 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
P04436 AC012640.4-201ENST00000606194 2550 ntBASIC8.72□□□□□ -1.01
P04436 NLRP1-214ENST00000577119 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 TOX4-203ENST00000448790 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 AC079062.1-202ENST00000581011 2636 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 METTL4-201ENST00000319888 3601 ntTSL 5 BASIC8.72□□□□□ -1.01
P04436 TRO-208ENST00000420798 3613 ntTSL 2 BASIC8.72□□□□□ -1.01
P04436 NECAP1-219ENST00000639811 2175 ntTSL 5 BASIC8.72□□□□□ -1.01
P04436 YEATS2-AS1-201ENST00000425008 2442 ntTSL 4 BASIC8.72□□□□□ -1.01
P04436 PRKCH-211ENST00000555082 2932 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 HIF1A-203ENST00000394997 3922 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 NCF2-202ENST00000367536 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 ASB11-202ENST00000380470 2748 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms