RNA–Protein interactions for RNA: ENST00000307198.11

LRTOMT-202, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LRTOMT, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-202ENST00000307198 NISCHQ9Y2I1 1504 aa20.46■□□□□ 0.87
LRTOMT-202ENST00000307198 HRCP23327 699 aa17.83■□□□□ 0.45
LRTOMT-202ENST00000307198 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
LRTOMT-202ENST00000307198 SUPT5HO00267 1087 aaKnown RBP17.57■□□□□ 0.4
LRTOMT-202ENST00000307198 MYO15BQ96JP2 1530 aa17.54■□□□□ 0.4
LRTOMT-202ENST00000307198 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
LRTOMT-202ENST00000307198 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
LRTOMT-202ENST00000307198 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
LRTOMT-202ENST00000307198 CCDC180Q9P1Z9 1646 aa17.31■□□□□ 0.36
LRTOMT-202ENST00000307198 PPARGC1BQ86YN6 1023 aaKnown RBP17.3■□□□□ 0.36
LRTOMT-202ENST00000307198 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
LRTOMT-202ENST00000307198 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
LRTOMT-202ENST00000307198 TRIM26Q12899 539 aaPredicted RBP16.97■□□□□ 0.31
LRTOMT-202ENST00000307198 LOC105371045A0A1W2PR82 267 aa16.87■□□□□ 0.29
LRTOMT-202ENST00000307198 ZEB1P37275 1124 aaPredicted RBP16.87■□□□□ 0.29
LRTOMT-202ENST00000307198 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
LRTOMT-202ENST00000307198 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
LRTOMT-202ENST00000307198 ABCC9O60706 1549 aa16.54■□□□□ 0.24
LRTOMT-202ENST00000307198 MYT1Q01538 1121 aa16.49■□□□□ 0.23
LRTOMT-202ENST00000307198 ACIN1Q9UKV3 1341 aaKnown RBP16.42■□□□□ 0.22
LRTOMT-202ENST00000307198 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
LRTOMT-202ENST00000307198 RSF1Q96T23 1441 aaPredicted RBP16.33■□□□□ 0.2
LRTOMT-202ENST00000307198 NEUROD1Q13562 356 aa16.32■□□□□ 0.2
LRTOMT-202ENST00000307198 RB1CC1Q8TDY2 1594 aa16.28■□□□□ 0.2
LRTOMT-202ENST00000307198 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
LRTOMT-202ENST00000307198 GTF3C3Q9Y5Q9 886 aa16.21■□□□□ 0.19
LRTOMT-202ENST00000307198 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
LRTOMT-202ENST00000307198 DIEXFQ68CQ4 756 aaKnown RBP16.15■□□□□ 0.18
LRTOMT-202ENST00000307198 CCER1Q8TC90 406 aaPredicted RBP16.13■□□□□ 0.17
LRTOMT-202ENST00000307198 SCRIBQ14160 1630 aa16.13■□□□□ 0.17
LRTOMT-202ENST00000307198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
LRTOMT-202ENST00000307198 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
LRTOMT-202ENST00000307198 WRNQ14191 1432 aaPredicted RBP eCLIP15.98■□□□□ 0.15
LRTOMT-202ENST00000307198 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.15
LRTOMT-202ENST00000307198 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
LRTOMT-202ENST00000307198 ZNF316A6NFI3 1004 aaPredicted RBP15.9■□□□□ 0.14
LRTOMT-202ENST00000307198 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
LRTOMT-202ENST00000307198 WIZO95785 1651 aa15.86■□□□□ 0.13
LRTOMT-202ENST00000307198 BAZ1AQ9NRL2 1556 aaPredicted RBP15.85■□□□□ 0.13
LRTOMT-202ENST00000307198 NACADO15069 1562 aa15.84■□□□□ 0.13
LRTOMT-202ENST00000307198 CEP162Q5TB80 1403 aa15.8■□□□□ 0.12
LRTOMT-202ENST00000307198 YTHDC1Q96MU7 727 aaKnown RBP15.74■□□□□ 0.11
LRTOMT-202ENST00000307198 TNIKQ9UKE5 1360 aa15.74■□□□□ 0.11
LRTOMT-202ENST00000307198 MIER1Q8N108 512 aa15.72■□□□□ 0.11
LRTOMT-202ENST00000307198 CCDC88BA6NC98 1476 aa15.68■□□□□ 0.1
LRTOMT-202ENST00000307198 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
LRTOMT-202ENST00000307198 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
LRTOMT-202ENST00000307198 EEA1Q15075 1411 aa15.65■□□□□ 0.1
LRTOMT-202ENST00000307198 ABCC8Q09428 1581 aa15.65■□□□□ 0.1
LRTOMT-202ENST00000307198 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
LRTOMT-202ENST00000307198 SOGA1O94964 1423 aa15.59■□□□□ 0.09
LRTOMT-202ENST00000307198 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
LRTOMT-202ENST00000307198 GOLGA3Q08378 1498 aa15.56■□□□□ 0.08
LRTOMT-202ENST00000307198 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
LRTOMT-202ENST00000307198 SMARCA4P51532 1647 aa15.52■□□□□ 0.08
LRTOMT-202ENST00000307198 SUPT16HQ9Y5B9 1047 aaKnown RBP15.51■□□□□ 0.07
LRTOMT-202ENST00000307198 RUSC2Q8N2Y8 1516 aa15.49■□□□□ 0.07
LRTOMT-202ENST00000307198 UBTFP17480 764 aaKnown RBP15.47■□□□□ 0.07
LRTOMT-202ENST00000307198 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
LRTOMT-202ENST00000307198 KIF21BO75037 1637 aa15.45■□□□□ 0.06
LRTOMT-202ENST00000307198 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
LRTOMT-202ENST00000307198 TSHZ2Q9NRE2 1034 aa15.42■□□□□ 0.06
LRTOMT-202ENST00000307198 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
LRTOMT-202ENST00000307198 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
LRTOMT-202ENST00000307198 CLIP1P30622 1438 aa15.38■□□□□ 0.05
LRTOMT-202ENST00000307198 UNC13AQ9UPW8 1703 aa15.35■□□□□ 0.05
LRTOMT-202ENST00000307198 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
LRTOMT-202ENST00000307198 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.04
LRTOMT-202ENST00000307198 BCL11AQ9H165 835 aa15.29■□□□□ 0.04
LRTOMT-202ENST00000307198 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
LRTOMT-202ENST00000307198 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
LRTOMT-202ENST00000307198 APLP2Q06481 763 aa15.25■□□□□ 0.03
LRTOMT-202ENST00000307198 RAPGEF2Q9Y4G8 1499 aa15.2■□□□□ 0.02
LRTOMT-202ENST00000307198 CUX2O14529 1486 aa15.2■□□□□ 0.02
LRTOMT-202ENST00000307198 RRBP1Q9P2E9 1410 aaKnown RBP15.15■□□□□ 0.02
LRTOMT-202ENST00000307198 ARAP1Q96P48 1450 aa15.1■□□□□ 0.01
LRTOMT-202ENST00000307198 ERICH3Q5RHP9 1530 aa15.1■□□□□ 0.01
LRTOMT-202ENST00000307198 BICRAQ9NZM4 1560 aa15.08■□□□□ 0
LRTOMT-202ENST00000307198 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
LRTOMT-202ENST00000307198 KCNH8Q96L42 1107 aa15.07■□□□□ 0
LRTOMT-202ENST00000307198 TOP2BQ02880 1626 aa15.07■□□□□ 0
LRTOMT-202ENST00000307198 FKBP8Q14318 412 aa15.06■□□□□ 0
LRTOMT-202ENST00000307198 BIVM-ERCC5R4GMW8 1640 aa15.05■□□□□ 0
LRTOMT-202ENST00000307198 RBM19Q9Y4C8 960 aaKnown RBP15.05■□□□□ -0
LRTOMT-202ENST00000307198 BCANQ96GW7 911 aa15.04■□□□□ -0
LRTOMT-202ENST00000307198 MAPKBP1O60336 1514 aa15.03■□□□□ -0
LRTOMT-202ENST00000307198 KANK4Q5T7N3 995 aaPredicted RBP15.02■□□□□ -0
LRTOMT-202ENST00000307198 PRXQ9BXM0 1461 aa15.02□□□□□ -0.01
LRTOMT-202ENST00000307198 CCNB3Q8WWL7 1395 aa15.01□□□□□ -0.01
LRTOMT-202ENST00000307198 NEFLP07196 543 aa14.98□□□□□ -0.01
LRTOMT-202ENST00000307198 ATAD2BQ9ULI0 1458 aa14.97□□□□□ -0.01
LRTOMT-202ENST00000307198 RANGAP1P46060 587 aaPredicted RBP14.96□□□□□ -0.01
LRTOMT-202ENST00000307198 RAB3GAP2Q9H2M9 1393 aa14.94□□□□□ -0.02
LRTOMT-202ENST00000307198 WDR97A6NE52 1622 aa14.94□□□□□ -0.02
LRTOMT-202ENST00000307198 CCER2I3L3R5 266 aa14.93□□□□□ -0.02
LRTOMT-202ENST00000307198 PPP1R15AO75807 674 aaPredicted RBP14.92□□□□□ -0.02
LRTOMT-202ENST00000307198 DDX10Q13206 875 aaKnown RBP14.9□□□□□ -0.02
LRTOMT-202ENST00000307198 MSH5O43196 834 aa14.9□□□□□ -0.02
LRTOMT-202ENST00000307198 FANCIQ9NVI1 1328 aa14.89□□□□□ -0.03
LRTOMT-202ENST00000307198 MAP3K1Q13233 1512 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms