RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 NISCHQ9Y2I1 1504 aa21.21■□□□□ 0.99
TCF4-254ENST00000626584 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
TCF4-254ENST00000626584 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
TCF4-254ENST00000626584 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
TCF4-254ENST00000626584 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
TCF4-254ENST00000626584 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
TCF4-254ENST00000626584 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
TCF4-254ENST00000626584 MYO15BQ96JP2 1530 aa17.12■□□□□ 0.33
TCF4-254ENST00000626584 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
TCF4-254ENST00000626584 ABCC9O60706 1549 aa16.94■□□□□ 0.3
TCF4-254ENST00000626584 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
TCF4-254ENST00000626584 NACADO15069 1562 aa16.8■□□□□ 0.28
TCF4-254ENST00000626584 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
TCF4-254ENST00000626584 RB1CC1Q8TDY2 1594 aa16.59■□□□□ 0.25
TCF4-254ENST00000626584 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
TCF4-254ENST00000626584 MROH2BQ7Z745 1585 aa16.42■□□□□ 0.22
TCF4-254ENST00000626584 BAZ1AQ9NRL2 1556 aaPredicted RBP16.33■□□□□ 0.2
TCF4-254ENST00000626584 HRCP23327 699 aa16.33■□□□□ 0.2
TCF4-254ENST00000626584 WIZO95785 1651 aa16.33■□□□□ 0.2
TCF4-254ENST00000626584 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
TCF4-254ENST00000626584 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
TCF4-254ENST00000626584 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
TCF4-254ENST00000626584 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
TCF4-254ENST00000626584 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
TCF4-254ENST00000626584 SMARCA4P51532 1647 aa16.18■□□□□ 0.18
TCF4-254ENST00000626584 TOP2AP11388 1531 aaKnown RBP16.17■□□□□ 0.18
TCF4-254ENST00000626584 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
TCF4-254ENST00000626584 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
TCF4-254ENST00000626584 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
TCF4-254ENST00000626584 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
TCF4-254ENST00000626584 PEG3Q9GZU2 1588 aa15.98■□□□□ 0.15
TCF4-254ENST00000626584 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
TCF4-254ENST00000626584 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
TCF4-254ENST00000626584 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
TCF4-254ENST00000626584 EEA1Q15075 1411 aa15.81■□□□□ 0.12
TCF4-254ENST00000626584 PPARGC1BQ86YN6 1023 aaKnown RBP15.8■□□□□ 0.12
TCF4-254ENST00000626584 ZEB1P37275 1124 aaPredicted RBP15.8■□□□□ 0.12
TCF4-254ENST00000626584 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
TCF4-254ENST00000626584 ATAD2BQ9ULI0 1458 aa15.74■□□□□ 0.11
TCF4-254ENST00000626584 WRNQ14191 1432 aaPredicted RBP eCLIP15.73■□□□□ 0.11
TCF4-254ENST00000626584 TNIKQ9UKE5 1360 aa15.7■□□□□ 0.1
TCF4-254ENST00000626584 SOGA1O94964 1423 aa15.69■□□□□ 0.1
TCF4-254ENST00000626584 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
TCF4-254ENST00000626584 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
TCF4-254ENST00000626584 CEP162Q5TB80 1403 aa15.63■□□□□ 0.09
TCF4-254ENST00000626584 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
TCF4-254ENST00000626584 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
TCF4-254ENST00000626584 GOLGA3Q08378 1498 aa15.61■□□□□ 0.09
TCF4-254ENST00000626584 RUSC2Q8N2Y8 1516 aa15.6■□□□□ 0.09
TCF4-254ENST00000626584 KIF21BO75037 1637 aa15.59■□□□□ 0.09
TCF4-254ENST00000626584 HMGXB3Q12766 1538 aa15.55■□□□□ 0.08
TCF4-254ENST00000626584 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
TCF4-254ENST00000626584 TOP2BQ02880 1626 aa15.51■□□□□ 0.07
TCF4-254ENST00000626584 NCAPD3P42695 1498 aa15.51■□□□□ 0.07
TCF4-254ENST00000626584 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
TCF4-254ENST00000626584 UBTFP17480 764 aaKnown RBP15.44■□□□□ 0.06
TCF4-254ENST00000626584 CLIP1P30622 1438 aa15.36■□□□□ 0.05
TCF4-254ENST00000626584 ERICH3Q5RHP9 1530 aa15.36■□□□□ 0.05
TCF4-254ENST00000626584 RAPGEF2Q9Y4G8 1499 aa15.35■□□□□ 0.05
TCF4-254ENST00000626584 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
TCF4-254ENST00000626584 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
TCF4-254ENST00000626584 CFTRP13569 1480 aa15.33■□□□□ 0.05
TCF4-254ENST00000626584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
TCF4-254ENST00000626584 CCER1Q8TC90 406 aaPredicted RBP15.31■□□□□ 0.04
TCF4-254ENST00000626584 CUX1P39880 1505 aa15.31■□□□□ 0.04
TCF4-254ENST00000626584 PRXQ9BXM0 1461 aa15.31■□□□□ 0.04
TCF4-254ENST00000626584 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
TCF4-254ENST00000626584 KIF27Q86VH2 1401 aa15.22■□□□□ 0.03
TCF4-254ENST00000626584 TTBK1Q5TCY1 1321 aaPredicted RBP15.18■□□□□ 0.02
TCF4-254ENST00000626584 ARAP1Q96P48 1450 aa15.17■□□□□ 0.02
TCF4-254ENST00000626584 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
TCF4-254ENST00000626584 APLP2Q06481 763 aa15.13■□□□□ 0.01
TCF4-254ENST00000626584 MYT1Q01538 1121 aa15.09■□□□□ 0.01
TCF4-254ENST00000626584 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
TCF4-254ENST00000626584 ARHGAP35Q9NRY4 1499 aa15.04■□□□□ -0
TCF4-254ENST00000626584 IGF1RP08069 1367 aa15.04■□□□□ -0
TCF4-254ENST00000626584 CUX2O14529 1486 aa15.03■□□□□ -0
TCF4-254ENST00000626584 FGD5Q6ZNL6 1462 aa15.03■□□□□ -0
TCF4-254ENST00000626584 HNRNPUL2Q1KMD3 747 aaKnown RBP15.02□□□□□ -0.01
TCF4-254ENST00000626584 RRBP1Q9P2E9 1410 aaKnown RBP15.01□□□□□ -0.01
TCF4-254ENST00000626584 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
TCF4-254ENST00000626584 MAP3K1Q13233 1512 aa15□□□□□ -0.01
TCF4-254ENST00000626584 ZNF316A6NFI3 1004 aaPredicted RBP14.98□□□□□ -0.01
TCF4-254ENST00000626584 CLSPNQ9HAW4 1339 aa14.98□□□□□ -0.01
TCF4-254ENST00000626584 DNMBPQ6XZF7 1577 aa14.98□□□□□ -0.01
TCF4-254ENST00000626584 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
TCF4-254ENST00000626584 RANGAP1P46060 587 aaPredicted RBP14.97□□□□□ -0.01
TCF4-254ENST00000626584 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.01
TCF4-254ENST00000626584 KANK4Q5T7N3 995 aaPredicted RBP14.94□□□□□ -0.02
TCF4-254ENST00000626584 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
TCF4-254ENST00000626584 TIAM1Q13009 1591 aa14.91□□□□□ -0.02
TCF4-254ENST00000626584 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
TCF4-254ENST00000626584 TOPBP1Q92547 1522 aa14.9□□□□□ -0.02
TCF4-254ENST00000626584 CUL7Q14999 1698 aa14.89□□□□□ -0.03
TCF4-254ENST00000626584 DHX57Q6P158 1386 aaKnown RBP14.89□□□□□ -0.03
TCF4-254ENST00000626584 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
TCF4-254ENST00000626584 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
TCF4-254ENST00000626584 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
TCF4-254ENST00000626584 CCNB3Q8WWL7 1395 aa14.87□□□□□ -0.03
TCF4-254ENST00000626584 ACIN1Q9UKV3 1341 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms