RNA–Protein interactions for RNA: ENST00000204615.11

THPO-201, Transcript of thrombopoietin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene THPO, Length 1,855 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THPO-201ENST00000204615 NISCHQ9Y2I1 1504 aa20.59■□□□□ 0.89
THPO-201ENST00000204615 CCDC180Q9P1Z9 1646 aa17.81■□□□□ 0.44
THPO-201ENST00000204615 ZCCHC6Q5VYS8 1495 aaKnown RBP17.53■□□□□ 0.4
THPO-201ENST00000204615 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
THPO-201ENST00000204615 HRCP23327 699 aa17.39■□□□□ 0.38
THPO-201ENST00000204615 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
THPO-201ENST00000204615 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
THPO-201ENST00000204615 CHIC1Q5VXU3 224 aa17.19■□□□□ 0.34
THPO-201ENST00000204615 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
THPO-201ENST00000204615 PCGF6Q9BYE7 350 aa16.96■□□□□ 0.31
THPO-201ENST00000204615 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
THPO-201ENST00000204615 ABCC9O60706 1549 aa16.83■□□□□ 0.28
THPO-201ENST00000204615 TRIM26Q12899 539 aaPredicted RBP16.72■□□□□ 0.27
THPO-201ENST00000204615 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
THPO-201ENST00000204615 PELP1Q8IZL8 1130 aaKnown RBP16.66■□□□□ 0.26
THPO-201ENST00000204615 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
THPO-201ENST00000204615 NACADO15069 1562 aa16.6■□□□□ 0.25
THPO-201ENST00000204615 LOC105371045A0A1W2PR82 267 aa16.54■□□□□ 0.24
THPO-201ENST00000204615 RB1CC1Q8TDY2 1594 aa16.44■□□□□ 0.22
THPO-201ENST00000204615 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
THPO-201ENST00000204615 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
THPO-201ENST00000204615 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
THPO-201ENST00000204615 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
THPO-201ENST00000204615 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
THPO-201ENST00000204615 MYT1Q01538 1121 aa16.04■□□□□ 0.16
THPO-201ENST00000204615 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
THPO-201ENST00000204615 BAZ1AQ9NRL2 1556 aaPredicted RBP15.99■□□□□ 0.15
THPO-201ENST00000204615 ACIN1Q9UKV3 1341 aaKnown RBP15.99■□□□□ 0.15
THPO-201ENST00000204615 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
THPO-201ENST00000204615 WRNQ14191 1432 aaPredicted RBP eCLIP15.95■□□□□ 0.14
THPO-201ENST00000204615 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
THPO-201ENST00000204615 FAM9AQ8IZU1 332 aaPredicted RBP15.93■□□□□ 0.14
THPO-201ENST00000204615 WIZO95785 1651 aa15.92■□□□□ 0.14
THPO-201ENST00000204615 CENPBP07199 599 aaPredicted RBP15.9■□□□□ 0.14
THPO-201ENST00000204615 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
THPO-201ENST00000204615 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
THPO-201ENST00000204615 CCER1Q8TC90 406 aaPredicted RBP15.85■□□□□ 0.13
THPO-201ENST00000204615 NEUROD1Q13562 356 aa15.82■□□□□ 0.12
THPO-201ENST00000204615 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
THPO-201ENST00000204615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.78■□□□□ 0.12
THPO-201ENST00000204615 TOP2AP11388 1531 aaKnown RBP15.76■□□□□ 0.11
THPO-201ENST00000204615 EEA1Q15075 1411 aa15.75■□□□□ 0.11
THPO-201ENST00000204615 GTF3C3Q9Y5Q9 886 aa15.72■□□□□ 0.11
THPO-201ENST00000204615 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
THPO-201ENST00000204615 TNIKQ9UKE5 1360 aa15.71■□□□□ 0.11
THPO-201ENST00000204615 SMARCA4P51532 1647 aa15.7■□□□□ 0.1
THPO-201ENST00000204615 SMARCA2P51531 1590 aa15.66■□□□□ 0.1
THPO-201ENST00000204615 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
THPO-201ENST00000204615 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
THPO-201ENST00000204615 ZNF316A6NFI3 1004 aaPredicted RBP15.62■□□□□ 0.09
THPO-201ENST00000204615 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
THPO-201ENST00000204615 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
THPO-201ENST00000204615 KIF21BO75037 1637 aa15.54■□□□□ 0.08
THPO-201ENST00000204615 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
THPO-201ENST00000204615 SOGA1O94964 1423 aa15.5■□□□□ 0.07
THPO-201ENST00000204615 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
THPO-201ENST00000204615 CLSPNQ9HAW4 1339 aa15.48■□□□□ 0.07
THPO-201ENST00000204615 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
THPO-201ENST00000204615 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
THPO-201ENST00000204615 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
THPO-201ENST00000204615 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
THPO-201ENST00000204615 VPS8Q8N3P4 1428 aa15.38■□□□□ 0.05
THPO-201ENST00000204615 UBTFP17480 764 aaKnown RBP15.37■□□□□ 0.05
THPO-201ENST00000204615 MIER1Q8N108 512 aa15.35■□□□□ 0.05
THPO-201ENST00000204615 NCAPD3P42695 1498 aa15.34■□□□□ 0.05
THPO-201ENST00000204615 CLIP1P30622 1438 aa15.33■□□□□ 0.04
THPO-201ENST00000204615 SYNJ1O43426 1573 aa15.31■□□□□ 0.04
THPO-201ENST00000204615 HMGXB3Q12766 1538 aa15.29■□□□□ 0.04
THPO-201ENST00000204615 TTBK1Q5TCY1 1321 aaPredicted RBP15.29■□□□□ 0.04
THPO-201ENST00000204615 YTHDC1Q96MU7 727 aaKnown RBP15.28■□□□□ 0.04
THPO-201ENST00000204615 CC2D2AQ9P2K1 1620 aa15.24■□□□□ 0.03
THPO-201ENST00000204615 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
THPO-201ENST00000204615 APLP2Q06481 763 aa15.2■□□□□ 0.02
THPO-201ENST00000204615 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
THPO-201ENST00000204615 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
THPO-201ENST00000204615 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
THPO-201ENST00000204615 CUX2O14529 1486 aa15.17■□□□□ 0.02
THPO-201ENST00000204615 RAPGEF2Q9Y4G8 1499 aa15.17■□□□□ 0.02
THPO-201ENST00000204615 DHX57Q6P158 1386 aaKnown RBP15.16■□□□□ 0.02
THPO-201ENST00000204615 RRBP1Q9P2E9 1410 aaKnown RBP15.11■□□□□ 0.01
THPO-201ENST00000204615 SUPT16HQ9Y5B9 1047 aaKnown RBP15.1■□□□□ 0.01
THPO-201ENST00000204615 PRXQ9BXM0 1461 aa15.07■□□□□ 0
THPO-201ENST00000204615 ARAP1Q96P48 1450 aa15.07■□□□□ 0
THPO-201ENST00000204615 CFTRP13569 1480 aa14.99□□□□□ -0.01
THPO-201ENST00000204615 MAP3K1Q13233 1512 aa14.98□□□□□ -0.01
THPO-201ENST00000204615 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.01
THPO-201ENST00000204615 ANP32EQ9BTT0 268 aa14.95□□□□□ -0.02
THPO-201ENST00000204615 CCNB3Q8WWL7 1395 aa14.94□□□□□ -0.02
THPO-201ENST00000204615 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
THPO-201ENST00000204615 PRDM2Q13029 1718 aa14.91□□□□□ -0.02
THPO-201ENST00000204615 MAPKBP1O60336 1514 aa14.9□□□□□ -0.02
THPO-201ENST00000204615 KIF27Q86VH2 1401 aa14.89□□□□□ -0.03
THPO-201ENST00000204615 DNAJC5BQ9UF47 199 aa14.88□□□□□ -0.03
THPO-201ENST00000204615 TIAM1Q13009 1591 aa14.87□□□□□ -0.03
THPO-201ENST00000204615 ARHGAP35Q9NRY4 1499 aa14.87□□□□□ -0.03
THPO-201ENST00000204615 KANK4Q5T7N3 995 aaPredicted RBP14.86□□□□□ -0.03
THPO-201ENST00000204615 TIMELESSQ9UNS1 1208 aa14.84□□□□□ -0.03
THPO-201ENST00000204615 CUX1P39880 1505 aa14.84□□□□□ -0.03
THPO-201ENST00000204615 CFAP43Q8NDM7 1665 aa14.83□□□□□ -0.03
THPO-201ENST00000204615 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms