Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ECE2-204ENST00000402825 3445 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 APOBEC3G-201ENST00000407997 1834 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 CDH26-203ENST00000350849 2494 ntTSL 2 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 TCF4-254ENST00000626584 1701 ntTSL 5 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 PRPF38B-203ENST00000370025 3693 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 NOL8-229ENST00000545558 4343 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 AC139700.1-201ENST00000605810 1540 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 SALRNA2-201ENST00000629082 2066 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 CHRNA1-202ENST00000348749 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 SLC39A12-AS1-201ENST00000439319 1966 ntTSL 2 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 SOX2-OT-213ENST00000492337 2508 ntTSL 2 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 AC009055.2-201ENST00000567058 1337 ntTSL 5 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 LINC02338-201ENST00000615202 2753 ntTSL 2 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 CTCFL-222ENST00000609232 3668 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 AL162274.3-201ENST00000623138 3109 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 RFPL1-201ENST00000354373 1496 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 RGS6-207ENST00000434263 1828 ntTSL 5 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 CSMD2-AS1-202ENST00000425631 1367 ntTSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 FP700111.1-201ENST00000441760 2502 ntTSL 2 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 APOBEC2-201ENST00000244669 1151 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 RNASE3-201ENST00000304639 720 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 RN7SKP291-201ENST00000362961 327 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 RN7SKP163-201ENST00000363221 330 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 RNU1-34P-201ENST00000364421 157 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 RN7SKP246-201ENST00000364553 317 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 SNORA71A-201ENST00000364729 134 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 SWT1-201ENST00000367500 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 DMRTC1B-202ENST00000373532 1100 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 PILRA-203ENST00000394000 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 MIR885-201ENST00000401316 74 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 AC021016.1-201ENST00000414167 498 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 FAM180A-202ENST00000415751 1073 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 LINC01238-201ENST00000416204 590 ntTSL 2 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 AL121999.1-201ENST00000420156 332 ntTSL 3 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 EMC3-202ENST00000429759 751 ntTSL 3 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 RPSAP28-201ENST00000437188 874 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 RPSAP55-201ENST00000477347 876 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 AC090579.1-201ENST00000518591 504 ntTSL 4 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 AC008066.1-201ENST00000520373 863 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 LINC01405-204ENST00000553177 524 ntTSL 4 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 CIPC-206ENST00000555611 599 ntTSL 4 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 AC105109.1-201ENST00000556012 1115 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 AC066613.2-201ENST00000561007 560 ntTSL 4 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 AC051619.5-203ENST00000561404 529 ntTSL 4 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 AC092139.1-201ENST00000567149 497 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 MIR7515HG-229ENST00000589150 962 ntTSL 5 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 FAM197Y2-203ENST00000598351 776 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 CYP2A7P2-201ENST00000600605 641 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 LINC01796-201ENST00000611915 709 ntTSL 3 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 SMIM2-202ENST00000617002 255 ntAPPRIS P1 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 KF456110.1-201ENST00000641105 385 ntBASIC8.78□□□□□ -1
NPIPA3F8WFD2 ZMAT2-201ENST00000274712 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 ZSCAN9-202ENST00000425468 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 PTPRE-202ENST00000306042 4957 ntTSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 PLSCR4-201ENST00000354952 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 ZNF561-202ENST00000326044 2017 ntTSL 2 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 SLC12A5-205ENST00000454036 3593 ntTSL 5 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 CYP19A1-204ENST00000405913 1697 ntTSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 PTPN20-225ENST00000511769 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 L3MBTL3-202ENST00000368136 4235 ntAPPRIS P4 TSL 5 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 OSBPL6-205ENST00000392505 3637 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
NPIPA3F8WFD2 SOX9-AS1-204ENST00000434703 3032 ntTSL 2 BASIC8.78□□□□□ -1
NPIPA3F8WFD2 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
NPIPA3F8WFD2 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC8.77□□□□□ -1
NPIPA3F8WFD2 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
NPIPA3F8WFD2 ZSCAN25-202ENST00000334715 4079 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
NPIPA3F8WFD2 Z95114.2-201ENST00000623490 2205 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 ZP2-203ENST00000574002 2749 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 ACTR3BP2-201ENST00000413404 1373 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 TWF1-211ENST00000552521 3012 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 MEF2C-203ENST00000437473 4340 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 TEX47-201ENST00000297203 1023 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 H2AFV-203ENST00000349299 596 ntTSL 2 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 OSCP1-202ENST00000354267 767 ntTSL 5 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 SNORA68B-201ENST00000364518 133 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 WISP3-205ENST00000409166 953 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC092373.1-201ENST00000414951 490 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AURKC-202ENST00000415300 978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 CHCHD2P5-201ENST00000421414 400 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC012501.1-203ENST00000424322 586 ntTSL 4 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC104170.1-202ENST00000426017 362 ntTSL 3 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC008267.4-201ENST00000442005 521 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 RPS28P7-201ENST00000473748 210 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms