RNA–Protein interactions for RNA: ENST00000492337.5

SOX2-OT-213, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 2,508 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-213ENST00000492337 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
SOX2-OT-213ENST00000492337 AEBP2Q6ZN18 517 aaPredicted RBP18.54■□□□□ 0.56
SOX2-OT-213ENST00000492337 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
SOX2-OT-213ENST00000492337 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
SOX2-OT-213ENST00000492337 ZCCHC6Q5VYS8 1495 aaKnown RBP17.77■□□□□ 0.44
SOX2-OT-213ENST00000492337 SHROOM4Q9ULL8 1493 aa17.66■□□□□ 0.42
SOX2-OT-213ENST00000492337 SUPT5HO00267 1087 aaKnown RBP17.36■□□□□ 0.37
SOX2-OT-213ENST00000492337 DCAF1Q9Y4B6 1507 aa17.3■□□□□ 0.36
SOX2-OT-213ENST00000492337 MYO15BQ96JP2 1530 aa17.03■□□□□ 0.32
SOX2-OT-213ENST00000492337 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
SOX2-OT-213ENST00000492337 ABCC9O60706 1549 aa16.78■□□□□ 0.28
SOX2-OT-213ENST00000492337 HRCP23327 699 aa16.69■□□□□ 0.26
SOX2-OT-213ENST00000492337 RSF1Q96T23 1441 aaPredicted RBP16.58■□□□□ 0.24
SOX2-OT-213ENST00000492337 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
SOX2-OT-213ENST00000492337 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
SOX2-OT-213ENST00000492337 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.22
SOX2-OT-213ENST00000492337 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
SOX2-OT-213ENST00000492337 NACADO15069 1562 aa16.44■□□□□ 0.22
SOX2-OT-213ENST00000492337 TRIM26Q12899 539 aaPredicted RBP16.28■□□□□ 0.2
SOX2-OT-213ENST00000492337 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
SOX2-OT-213ENST00000492337 MROH2BQ7Z745 1585 aa16.24■□□□□ 0.19
SOX2-OT-213ENST00000492337 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
SOX2-OT-213ENST00000492337 PPARGC1BQ86YN6 1023 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-213ENST00000492337 WIZO95785 1651 aa16.14■□□□□ 0.17
SOX2-OT-213ENST00000492337 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
SOX2-OT-213ENST00000492337 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
SOX2-OT-213ENST00000492337 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-213ENST00000492337 FAM9AQ8IZU1 332 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-213ENST00000492337 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
SOX2-OT-213ENST00000492337 SMARCA4P51532 1647 aa15.93■□□□□ 0.14
SOX2-OT-213ENST00000492337 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
SOX2-OT-213ENST00000492337 SMARCA2P51531 1590 aa15.86■□□□□ 0.13
SOX2-OT-213ENST00000492337 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
SOX2-OT-213ENST00000492337 SENP3Q9H4L4 574 aaPredicted RBP15.79■□□□□ 0.12
SOX2-OT-213ENST00000492337 ABCC8Q09428 1581 aa15.77■□□□□ 0.12
SOX2-OT-213ENST00000492337 PHF23Q9BUL5 403 aaPredicted RBP15.77■□□□□ 0.12
SOX2-OT-213ENST00000492337 WRNQ14191 1432 aaPredicted RBP eCLIP15.76■□□□□ 0.11
SOX2-OT-213ENST00000492337 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
SOX2-OT-213ENST00000492337 EEA1Q15075 1411 aa15.71■□□□□ 0.11
SOX2-OT-213ENST00000492337 PEG3Q9GZU2 1588 aa15.71■□□□□ 0.11
SOX2-OT-213ENST00000492337 BICRAQ9NZM4 1560 aa15.69■□□□□ 0.1
SOX2-OT-213ENST00000492337 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
SOX2-OT-213ENST00000492337 SOGA1O94964 1423 aa15.65■□□□□ 0.1
SOX2-OT-213ENST00000492337 CEP162Q5TB80 1403 aa15.65■□□□□ 0.1
SOX2-OT-213ENST00000492337 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
SOX2-OT-213ENST00000492337 RUSC2Q8N2Y8 1516 aa15.56■□□□□ 0.08
SOX2-OT-213ENST00000492337 GOLGA3Q08378 1498 aa15.54■□□□□ 0.08
SOX2-OT-213ENST00000492337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
SOX2-OT-213ENST00000492337 KIF21BO75037 1637 aa15.49■□□□□ 0.07
SOX2-OT-213ENST00000492337 CCER1Q8TC90 406 aaPredicted RBP15.49■□□□□ 0.07
SOX2-OT-213ENST00000492337 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
SOX2-OT-213ENST00000492337 SYNJ1O43426 1573 aa15.48■□□□□ 0.07
SOX2-OT-213ENST00000492337 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
SOX2-OT-213ENST00000492337 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
SOX2-OT-213ENST00000492337 UBTFP17480 764 aaKnown RBP15.41■□□□□ 0.06
SOX2-OT-213ENST00000492337 BAZ1BQ9UIG0 1483 aaKnown RBP15.41■□□□□ 0.06
SOX2-OT-213ENST00000492337 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
SOX2-OT-213ENST00000492337 CLIP1P30622 1438 aa15.33■□□□□ 0.04
SOX2-OT-213ENST00000492337 TOP2BQ02880 1626 aa15.33■□□□□ 0.04
SOX2-OT-213ENST00000492337 VPS8Q8N3P4 1428 aa15.32■□□□□ 0.04
SOX2-OT-213ENST00000492337 BIVM-ERCC5R4GMW8 1640 aa15.3■□□□□ 0.04
SOX2-OT-213ENST00000492337 TTBK1Q5TCY1 1321 aaPredicted RBP15.29■□□□□ 0.04
SOX2-OT-213ENST00000492337 RAPGEF2Q9Y4G8 1499 aa15.29■□□□□ 0.04
SOX2-OT-213ENST00000492337 DIEXFQ68CQ4 756 aaKnown RBP15.27■□□□□ 0.03
SOX2-OT-213ENST00000492337 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
SOX2-OT-213ENST00000492337 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
SOX2-OT-213ENST00000492337 HMGXB3Q12766 1538 aa15.24■□□□□ 0.03
SOX2-OT-213ENST00000492337 ERICH3Q5RHP9 1530 aa15.24■□□□□ 0.03
SOX2-OT-213ENST00000492337 NCAPD3P42695 1498 aa15.21■□□□□ 0.02
SOX2-OT-213ENST00000492337 PRXQ9BXM0 1461 aa15.21■□□□□ 0.02
SOX2-OT-213ENST00000492337 ZNF316A6NFI3 1004 aaPredicted RBP15.18■□□□□ 0.02
SOX2-OT-213ENST00000492337 NEUROD1Q13562 356 aa15.17■□□□□ 0.02
SOX2-OT-213ENST00000492337 CUX1P39880 1505 aa15.13■□□□□ 0.01
SOX2-OT-213ENST00000492337 ARAP1Q96P48 1450 aa15.12■□□□□ 0.01
SOX2-OT-213ENST00000492337 CENPBP07199 599 aaPredicted RBP15.11■□□□□ 0.01
SOX2-OT-213ENST00000492337 APLP2Q06481 763 aa15.1■□□□□ 0.01
SOX2-OT-213ENST00000492337 HNRNPUL2Q1KMD3 747 aaKnown RBP15.1■□□□□ 0.01
SOX2-OT-213ENST00000492337 CFTRP13569 1480 aa15.1■□□□□ 0.01
SOX2-OT-213ENST00000492337 KIF27Q86VH2 1401 aa15.06■□□□□ 0
SOX2-OT-213ENST00000492337 CLSPNQ9HAW4 1339 aa15.05■□□□□ 0
SOX2-OT-213ENST00000492337 RRBP1Q9P2E9 1410 aaKnown RBP15.01□□□□□ -0.01
SOX2-OT-213ENST00000492337 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
SOX2-OT-213ENST00000492337 GTF3C3Q9Y5Q9 886 aa15□□□□□ -0.01
SOX2-OT-213ENST00000492337 CUX2O14529 1486 aa14.98□□□□□ -0.01
SOX2-OT-213ENST00000492337 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
SOX2-OT-213ENST00000492337 ARHGAP35Q9NRY4 1499 aa14.97□□□□□ -0.01
SOX2-OT-213ENST00000492337 KANK4Q5T7N3 995 aaPredicted RBP14.96□□□□□ -0.02
SOX2-OT-213ENST00000492337 RANGAP1P46060 587 aaPredicted RBP14.94□□□□□ -0.02
SOX2-OT-213ENST00000492337 MIER1Q8N108 512 aa14.93□□□□□ -0.02
SOX2-OT-213ENST00000492337 MAP3K1Q13233 1512 aa14.91□□□□□ -0.02
SOX2-OT-213ENST00000492337 IGF1RP08069 1367 aa14.89□□□□□ -0.03
SOX2-OT-213ENST00000492337 CCNB3Q8WWL7 1395 aa14.87□□□□□ -0.03
SOX2-OT-213ENST00000492337 CADPSQ9ULU8 1353 aa14.87□□□□□ -0.03
SOX2-OT-213ENST00000492337 TIAM1Q13009 1591 aa14.84□□□□□ -0.03
SOX2-OT-213ENST00000492337 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
SOX2-OT-213ENST00000492337 CARMIL1Q5VZK9 1371 aa14.81□□□□□ -0.04
SOX2-OT-213ENST00000492337 YTHDC1Q96MU7 727 aaKnown RBP14.79□□□□□ -0.04
SOX2-OT-213ENST00000492337 LRRC9Q6ZRR7 1453 aa14.77□□□□□ -0.05
SOX2-OT-213ENST00000492337 CFAP43Q8NDM7 1665 aa14.75□□□□□ -0.05
SOX2-OT-213ENST00000492337 MAPKBP1O60336 1514 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms