Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.37■■□□□ 1.81
TNNQ9UQP3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
TNNQ9UQP3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
TNNQ9UQP3 AC091799.1-201ENST00000422823 811 ntBASIC26.37■■□□□ 1.81
TNNQ9UQP3 KRT18P20-201ENST00000548986 1279 ntBASIC26.37■■□□□ 1.81
TNNQ9UQP3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.37■■□□□ 1.81
TNNQ9UQP3 MIR5787-201ENST00000611784 55 ntBASIC26.37■■□□□ 1.81
TNNQ9UQP3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TNNQ9UQP3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.37■■□□□ 1.81
TNNQ9UQP3 LINC01006-201ENST00000333319 2292 ntBASIC26.37■■□□□ 1.81
TNNQ9UQP3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TNNQ9UQP3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNNQ9UQP3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNNQ9UQP3 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.36■■□□□ 1.81
TNNQ9UQP3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TNNQ9UQP3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.36■■□□□ 1.81
TNNQ9UQP3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.36■■□□□ 1.81
TNNQ9UQP3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
TNNQ9UQP3 MFSD11-216ENST00000590393 1141 ntBASIC26.36■■□□□ 1.81
TNNQ9UQP3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.36■■□□□ 1.81
TNNQ9UQP3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TNNQ9UQP3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.35■■□□□ 1.81
TNNQ9UQP3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TNNQ9UQP3 AC137761.2-201ENST00000561729 223 ntBASIC26.35■■□□□ 1.81
TNNQ9UQP3 AC145350.3-201ENST00000569033 163 ntBASIC26.35■■□□□ 1.81
TNNQ9UQP3 AC022517.1-201ENST00000592429 346 ntBASIC26.35■■□□□ 1.81
TNNQ9UQP3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.35■■□□□ 1.81
TNNQ9UQP3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC26.35■■□□□ 1.81
TNNQ9UQP3 FEM1AP1-201ENST00000431297 1995 ntBASIC26.35■■□□□ 1.81
TNNQ9UQP3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TNNQ9UQP3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.34■■□□□ 1.81
TNNQ9UQP3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNNQ9UQP3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.34■■□□□ 1.81
TNNQ9UQP3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNNQ9UQP3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TNNQ9UQP3 AL121603.2-201ENST00000557373 2117 ntBASIC26.34■■□□□ 1.81
TNNQ9UQP3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.34■■□□□ 1.81
TNNQ9UQP3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.34■■□□□ 1.81
TNNQ9UQP3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.34■■□□□ 1.81
TNNQ9UQP3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
TNNQ9UQP3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
TNNQ9UQP3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC26.34■■□□□ 1.81
TNNQ9UQP3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNNQ9UQP3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TNNQ9UQP3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TNNQ9UQP3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TNNQ9UQP3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.33■■□□□ 1.81
TNNQ9UQP3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNNQ9UQP3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.33■■□□□ 1.81
TNNQ9UQP3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNNQ9UQP3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.33■■□□□ 1.81
TNNQ9UQP3 AC006015.1-201ENST00000429970 570 ntBASIC26.33■■□□□ 1.81
TNNQ9UQP3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.33■■□□□ 1.81
TNNQ9UQP3 AC073130.3-201ENST00000624389 2278 ntBASIC26.33■■□□□ 1.81
TNNQ9UQP3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
TNNQ9UQP3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNNQ9UQP3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNNQ9UQP3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
TNNQ9UQP3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TNNQ9UQP3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TNNQ9UQP3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TNNQ9UQP3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.32■■□□□ 1.8
TNNQ9UQP3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.32■■□□□ 1.8
TNNQ9UQP3 AC245052.3-201ENST00000450182 901 ntBASIC26.32■■□□□ 1.8
TNNQ9UQP3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
TNNQ9UQP3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.32■■□□□ 1.8
TNNQ9UQP3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.32■■□□□ 1.8
TNNQ9UQP3 AC011484.1-201ENST00000377652 1995 ntBASIC26.32■■□□□ 1.8
TNNQ9UQP3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
TNNQ9UQP3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNNQ9UQP3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNNQ9UQP3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
TNNQ9UQP3 AC027702.1-201ENST00000563810 1770 ntBASIC26.31■■□□□ 1.8
TNNQ9UQP3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TNNQ9UQP3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNNQ9UQP3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TNNQ9UQP3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TNNQ9UQP3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNNQ9UQP3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNNQ9UQP3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.31■■□□□ 1.8
TNNQ9UQP3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.31■■□□□ 1.8
TNNQ9UQP3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.31■■□□□ 1.8
TNNQ9UQP3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.31■■□□□ 1.8
TNNQ9UQP3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNNQ9UQP3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNNQ9UQP3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC26.31■■□□□ 1.8
TNNQ9UQP3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC26.31■■□□□ 1.8
TNNQ9UQP3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNNQ9UQP3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNNQ9UQP3 SLC7A5P1-201ENST00000568957 537 ntBASIC26.3■■□□□ 1.8
TNNQ9UQP3 AC120498.10-201ENST00000621827 505 ntBASIC26.3■■□□□ 1.8
TNNQ9UQP3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC26.3■■□□□ 1.8
TNNQ9UQP3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.3■■□□□ 1.8
TNNQ9UQP3 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.3■■□□□ 1.8
TNNQ9UQP3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TNNQ9UQP3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNNQ9UQP3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.29■■□□□ 1.8
TNNQ9UQP3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNNQ9UQP3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNNQ9UQP3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms