Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAMD4AQ9UPU9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SAMD4AQ9UPU9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAMD4AQ9UPU9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAMD4AQ9UPU9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SAMD4AQ9UPU9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SAMD4AQ9UPU9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SAMD4AQ9UPU9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SAMD4AQ9UPU9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 AC011484.1-201ENST00000377652 1995 ntBASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAMD4AQ9UPU9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.29■□□□□ 0.68
SAMD4AQ9UPU9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 AC005224.4-201ENST00000583262 1652 ntBASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.28■□□□□ 0.68
SAMD4AQ9UPU9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAMD4AQ9UPU9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAMD4AQ9UPU9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms