Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.65■■□□□ 1.38
RNF146Q9NTX7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF146Q9NTX7 RPS2P52-201ENST00000469610 820 ntBASIC23.65■■□□□ 1.38
RNF146Q9NTX7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF146Q9NTX7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF146Q9NTX7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF146Q9NTX7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF146Q9NTX7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF146Q9NTX7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF146Q9NTX7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.64■■□□□ 1.38
RNF146Q9NTX7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RNF146Q9NTX7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF146Q9NTX7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF146Q9NTX7 AC093827.2-201ENST00000512654 315 ntBASIC23.64■■□□□ 1.37
RNF146Q9NTX7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF146Q9NTX7 AC105020.6-201ENST00000621523 1217 ntBASIC23.64■■□□□ 1.37
RNF146Q9NTX7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF146Q9NTX7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF146Q9NTX7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF146Q9NTX7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF146Q9NTX7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF146Q9NTX7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF146Q9NTX7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
RNF146Q9NTX7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF146Q9NTX7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF146Q9NTX7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.62■■□□□ 1.37
RNF146Q9NTX7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.62■■□□□ 1.37
RNF146Q9NTX7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF146Q9NTX7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.62■■□□□ 1.37
RNF146Q9NTX7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF146Q9NTX7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 GCSHP5-201ENST00000443090 522 ntBASIC23.61■■□□□ 1.37
RNF146Q9NTX7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 AC073648.6-201ENST00000641589 218 ntBASIC23.61■■□□□ 1.37
RNF146Q9NTX7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF146Q9NTX7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 PNMA6B-201ENST00000538162 1200 ntBASIC23.6■■□□□ 1.37
RNF146Q9NTX7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 AC008403.3-201ENST00000598924 454 ntBASIC23.6■■□□□ 1.37
RNF146Q9NTX7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF146Q9NTX7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 AC092368.3-202ENST00000574180 1591 ntBASIC23.59■■□□□ 1.37
RNF146Q9NTX7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF146Q9NTX7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF146Q9NTX7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF146Q9NTX7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF146Q9NTX7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF146Q9NTX7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF146Q9NTX7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms