Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HINT3Q9NQE9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HINT3Q9NQE9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.64■□□□□ 0.58
HINT3Q9NQE9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.64■□□□□ 0.58
HINT3Q9NQE9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HINT3Q9NQE9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 AFG3L1P-217ENST00000557444 2447 ntBASIC18.63■□□□□ 0.57
HINT3Q9NQE9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HINT3Q9NQE9 FP700111.2-201ENST00000619190 1892 ntBASIC18.63■□□□□ 0.57
HINT3Q9NQE9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 AL358852.1-201ENST00000623174 1268 ntBASIC18.62■□□□□ 0.57
HINT3Q9NQE9 AC105233.4-201ENST00000642045 216 ntBASIC18.62■□□□□ 0.57
HINT3Q9NQE9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HINT3Q9NQE9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms