Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CDC42EP4Q9H3Q1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42EP4Q9H3Q1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 AC005224.4-201ENST00000583262 1652 ntBASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42EP4Q9H3Q1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
CDC42EP4Q9H3Q1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDC42EP4Q9H3Q1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDC42EP4Q9H3Q1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 AC131281.2-201ENST00000520478 145 ntBASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42EP4Q9H3Q1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 AL356441.2-201ENST00000443009 864 ntBASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 IGHV3-19-201ENST00000521488 291 ntBASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CDC42EP4Q9H3Q1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 MIR4767-201ENST00000582827 78 ntBASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.99■□□□□ 0.95
CDC42EP4Q9H3Q1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms