Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDC1Q9BTX1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDC1Q9BTX1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDC1Q9BTX1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NDC1Q9BTX1 AC093787.1-201ENST00000450396 207 ntBASIC19.74■□□□□ 0.75
NDC1Q9BTX1 AL138781.1-201ENST00000566567 1274 ntBASIC19.74■□□□□ 0.75
NDC1Q9BTX1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.74■□□□□ 0.75
NDC1Q9BTX1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.74■□□□□ 0.75
NDC1Q9BTX1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.74■□□□□ 0.75
NDC1Q9BTX1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDC1Q9BTX1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDC1Q9BTX1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDC1Q9BTX1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 MIR4758-201ENST00000577688 71 ntBASIC19.73■□□□□ 0.75
NDC1Q9BTX1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDC1Q9BTX1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 AC133041.1-202ENST00000642053 222 ntBASIC19.72■□□□□ 0.75
NDC1Q9BTX1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDC1Q9BTX1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 MIPEPP3-201ENST00000412105 444 ntBASIC19.71■□□□□ 0.75
NDC1Q9BTX1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 FAM21FP-204ENST00000608637 956 ntBASIC19.71■□□□□ 0.75
NDC1Q9BTX1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.71■□□□□ 0.75
NDC1Q9BTX1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 BX276092.2-201ENST00000417668 665 ntBASIC19.7■□□□□ 0.74
NDC1Q9BTX1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 AC069152.1-201ENST00000438030 544 ntBASIC19.7■□□□□ 0.74
NDC1Q9BTX1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDC1Q9BTX1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 AC010980.2-201ENST00000587099 1412 ntBASIC19.69■□□□□ 0.74
NDC1Q9BTX1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms