Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SEMA3CQ99985 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA3CQ99985 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA3CQ99985 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA3CQ99985 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA3CQ99985 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
SEMA3CQ99985 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.97■□□□□ 0.95
SEMA3CQ99985 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.97■□□□□ 0.95
SEMA3CQ99985 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA3CQ99985 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA3CQ99985 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
SEMA3CQ99985 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.96■□□□□ 0.95
SEMA3CQ99985 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA3CQ99985 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA3CQ99985 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA3CQ99985 PLK5-205ENST00000642079 1969 ntBASIC20.96■□□□□ 0.95
SEMA3CQ99985 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.96■□□□□ 0.95
SEMA3CQ99985 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA3CQ99985 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA3CQ99985 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA3CQ99985 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA3CQ99985 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SEMA3CQ99985 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SEMA3CQ99985 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
SEMA3CQ99985 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 AC116050.2-201ENST00000612102 1779 ntBASIC20.95■□□□□ 0.94
SEMA3CQ99985 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SEMA3CQ99985 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.95■□□□□ 0.94
SEMA3CQ99985 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 AC007322.4-201ENST00000509611 723 ntBASIC20.95■□□□□ 0.94
SEMA3CQ99985 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.95■□□□□ 0.94
SEMA3CQ99985 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.95■□□□□ 0.94
SEMA3CQ99985 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.95■□□□□ 0.94
SEMA3CQ99985 AC073111.5-205ENST00000641717 521 ntBASIC20.95■□□□□ 0.94
SEMA3CQ99985 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 AC011484.1-201ENST00000377652 1995 ntBASIC20.95■□□□□ 0.94
SEMA3CQ99985 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SEMA3CQ99985 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.95■□□□□ 0.94
SEMA3CQ99985 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA3CQ99985 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SEMA3CQ99985 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SEMA3CQ99985 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA3CQ99985 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SEMA3CQ99985 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
SEMA3CQ99985 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SEMA3CQ99985 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SEMA3CQ99985 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA3CQ99985 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA3CQ99985 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.94■□□□□ 0.94
SEMA3CQ99985 AC231657.2-201ENST00000624556 255 ntBASIC20.94■□□□□ 0.94
SEMA3CQ99985 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA3CQ99985 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
SEMA3CQ99985 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SEMA3CQ99985 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA3CQ99985 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SEMA3CQ99985 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.93■□□□□ 0.94
SEMA3CQ99985 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA3CQ99985 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA3CQ99985 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA3CQ99985 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA3CQ99985 AC007322.1-201ENST00000426983 750 ntBASIC20.93■□□□□ 0.94
SEMA3CQ99985 CDCA4P2-201ENST00000441182 718 ntBASIC20.93■□□□□ 0.94
SEMA3CQ99985 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.93■□□□□ 0.94
SEMA3CQ99985 AL591742.1-201ENST00000604433 565 ntBASIC20.93■□□□□ 0.94
SEMA3CQ99985 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.93■□□□□ 0.94
SEMA3CQ99985 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA3CQ99985 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA3CQ99985 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA3CQ99985 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA3CQ99985 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SEMA3CQ99985 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA3CQ99985 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SEMA3CQ99985 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.92■□□□□ 0.94
SEMA3CQ99985 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA3CQ99985 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SEMA3CQ99985 AC007322.3-201ENST00000426526 701 ntBASIC20.92■□□□□ 0.94
SEMA3CQ99985 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
SEMA3CQ99985 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SEMA3CQ99985 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA3CQ99985 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA3CQ99985 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA3CQ99985 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA3CQ99985 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SEMA3CQ99985 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.92■□□□□ 0.94
SEMA3CQ99985 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA3CQ99985 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.92■□□□□ 0.94
SEMA3CQ99985 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms