Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GFI1Q99684 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFI1Q99684 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
GFI1Q99684 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.86■□□□□ 0.45
GFI1Q99684 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.86■□□□□ 0.45
GFI1Q99684 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.86■□□□□ 0.45
GFI1Q99684 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.86■□□□□ 0.45
GFI1Q99684 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 AC009237.3-201ENST00000393279 1427 ntBASIC17.85■□□□□ 0.45
GFI1Q99684 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.85■□□□□ 0.45
GFI1Q99684 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.85■□□□□ 0.45
GFI1Q99684 AL020996.1-203ENST00000536896 2307 ntBASIC17.85■□□□□ 0.45
GFI1Q99684 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.85■□□□□ 0.45
GFI1Q99684 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFI1Q99684 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.84■□□□□ 0.45
GFI1Q99684 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.84■□□□□ 0.45
GFI1Q99684 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GFI1Q99684 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFI1Q99684 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.84■□□□□ 0.45
GFI1Q99684 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFI1Q99684 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
GFI1Q99684 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.84■□□□□ 0.45
GFI1Q99684 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
GFI1Q99684 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
GFI1Q99684 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFI1Q99684 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.84■□□□□ 0.45
GFI1Q99684 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.84■□□□□ 0.45
GFI1Q99684 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.84■□□□□ 0.45
GFI1Q99684 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.84■□□□□ 0.45
GFI1Q99684 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFI1Q99684 AL035685.1-201ENST00000636663 812 ntBASIC17.84■□□□□ 0.45
GFI1Q99684 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFI1Q99684 AC116562.4-201ENST00000641316 2276 ntBASIC17.84■□□□□ 0.45
GFI1Q99684 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFI1Q99684 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFI1Q99684 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
GFI1Q99684 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFI1Q99684 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFI1Q99684 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
GFI1Q99684 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFI1Q99684 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GFI1Q99684 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GFI1Q99684 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GFI1Q99684 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
GFI1Q99684 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
GFI1Q99684 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.83■□□□□ 0.45
GFI1Q99684 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.83■□□□□ 0.45
GFI1Q99684 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
GFI1Q99684 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.83■□□□□ 0.44
GFI1Q99684 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.83■□□□□ 0.44
GFI1Q99684 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
GFI1Q99684 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GFI1Q99684 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
GFI1Q99684 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.83■□□□□ 0.44
GFI1Q99684 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GFI1Q99684 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.83■□□□□ 0.44
GFI1Q99684 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GFI1Q99684 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GFI1Q99684 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.83■□□□□ 0.44
GFI1Q99684 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GFI1Q99684 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GFI1Q99684 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.82■□□□□ 0.44
GFI1Q99684 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GFI1Q99684 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
GFI1Q99684 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
GFI1Q99684 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.82■□□□□ 0.44
GFI1Q99684 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.82■□□□□ 0.44
GFI1Q99684 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.82■□□□□ 0.44
GFI1Q99684 AC005224.4-201ENST00000583262 1652 ntBASIC17.82■□□□□ 0.44
GFI1Q99684 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
GFI1Q99684 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
GFI1Q99684 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GFI1Q99684 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GFI1Q99684 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GFI1Q99684 AC092720.2-201ENST00000602388 1665 ntBASIC17.81■□□□□ 0.44
GFI1Q99684 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GFI1Q99684 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
GFI1Q99684 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GFI1Q99684 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GFI1Q99684 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.81■□□□□ 0.44
GFI1Q99684 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GFI1Q99684 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.81■□□□□ 0.44
GFI1Q99684 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.81■□□□□ 0.44
GFI1Q99684 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GFI1Q99684 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GFI1Q99684 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GFI1Q99684 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
GFI1Q99684 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
GFI1Q99684 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GFI1Q99684 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.8■□□□□ 0.44
GFI1Q99684 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms