Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPENQ96T58 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SPENQ96T58 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPENQ96T58 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPENQ96T58 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.79■□□□□ 0.6
SPENQ96T58 POU5F1P4-201ENST00000413175 1085 ntBASIC18.79■□□□□ 0.6
SPENQ96T58 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.79■□□□□ 0.6
SPENQ96T58 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.79■□□□□ 0.6
SPENQ96T58 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.79■□□□□ 0.6
SPENQ96T58 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.79■□□□□ 0.6
SPENQ96T58 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.79■□□□□ 0.6
SPENQ96T58 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SPENQ96T58 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPENQ96T58 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPENQ96T58 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPENQ96T58 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.78■□□□□ 0.6
SPENQ96T58 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPENQ96T58 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPENQ96T58 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPENQ96T58 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPENQ96T58 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.78■□□□□ 0.6
SPENQ96T58 RN7SL471P-201ENST00000580476 299 ntBASIC18.78■□□□□ 0.6
SPENQ96T58 AL589743.5-201ENST00000616611 1050 ntBASIC18.78■□□□□ 0.6
SPENQ96T58 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.78■□□□□ 0.6
SPENQ96T58 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.78■□□□□ 0.6
SPENQ96T58 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.78■□□□□ 0.6
SPENQ96T58 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SPENQ96T58 MIR4785-201ENST00000585005 73 ntBASIC18.78■□□□□ 0.6
SPENQ96T58 FAM21FP-204ENST00000608637 956 ntBASIC18.78■□□□□ 0.6
SPENQ96T58 AC008175.2-201ENST00000612840 297 ntBASIC18.78■□□□□ 0.6
SPENQ96T58 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPENQ96T58 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPENQ96T58 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPENQ96T58 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPENQ96T58 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPENQ96T58 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SPENQ96T58 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.77■□□□□ 0.6
SPENQ96T58 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPENQ96T58 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.77■□□□□ 0.6
SPENQ96T58 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SPENQ96T58 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.77■□□□□ 0.6
SPENQ96T58 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.77■□□□□ 0.6
SPENQ96T58 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.77■□□□□ 0.6
SPENQ96T58 AL023875.1-201ENST00000640777 796 ntBASIC18.77■□□□□ 0.6
SPENQ96T58 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPENQ96T58 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.77■□□□□ 0.6
SPENQ96T58 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPENQ96T58 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPENQ96T58 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPENQ96T58 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.77■□□□□ 0.6
SPENQ96T58 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.77■□□□□ 0.6
SPENQ96T58 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPENQ96T58 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.77■□□□□ 0.6
SPENQ96T58 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.77■□□□□ 0.6
SPENQ96T58 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.77■□□□□ 0.6
SPENQ96T58 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SPENQ96T58 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SPENQ96T58 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPENQ96T58 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPENQ96T58 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPENQ96T58 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.77■□□□□ 0.59
SPENQ96T58 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.59
SPENQ96T58 AL049637.2-201ENST00000641778 930 ntBASIC18.77■□□□□ 0.59
SPENQ96T58 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPENQ96T58 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.76■□□□□ 0.59
SPENQ96T58 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 AL353708.3-201ENST00000610272 989 ntBASIC18.76■□□□□ 0.59
SPENQ96T58 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.76■□□□□ 0.59
SPENQ96T58 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.76■□□□□ 0.59
SPENQ96T58 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SPENQ96T58 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SPENQ96T58 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SPENQ96T58 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.76■□□□□ 0.59
SPENQ96T58 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPENQ96T58 MTDHP1-201ENST00000605323 784 ntBASIC18.76■□□□□ 0.59
SPENQ96T58 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms