Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 CYP21A1P-202ENST00000354927 1481 ntBASIC20.32■□□□□ 0.84
PCDH15Q96QU1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 AC233702.5-201ENST00000584107 538 ntBASIC20.32■□□□□ 0.84
PCDH15Q96QU1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 AC124016.1-201ENST00000609552 612 ntBASIC20.31■□□□□ 0.84
PCDH15Q96QU1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 FAM99A-202ENST00000538190 1989 ntBASIC20.31■□□□□ 0.84
PCDH15Q96QU1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH15Q96QU1 RPS2P55-201ENST00000397318 883 ntBASIC20.3■□□□□ 0.84
PCDH15Q96QU1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 TSPY7P-201ENST00000431358 1114 ntBASIC20.3■□□□□ 0.84
PCDH15Q96QU1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 AC133681.1-201ENST00000465482 601 ntBASIC20.3■□□□□ 0.84
PCDH15Q96QU1 AC107956.1-201ENST00000494359 873 ntBASIC20.3■□□□□ 0.84
PCDH15Q96QU1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 MTDHP1-201ENST00000605323 784 ntBASIC20.3■□□□□ 0.84
PCDH15Q96QU1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH15Q96QU1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 AL355075.4-201ENST00000554988 638 ntBASIC20.29■□□□□ 0.84
PCDH15Q96QU1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDH15Q96QU1 AC087633.2-202ENST00000565166 1439 ntBASIC20.29■□□□□ 0.84
PCDH15Q96QU1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 AC068473.5-201ENST00000616428 2072 ntBASIC20.28■□□□□ 0.84
PCDH15Q96QU1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH15Q96QU1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 REXO1L12P-201ENST00000622156 912 ntBASIC20.27■□□□□ 0.84
PCDH15Q96QU1 AL049637.2-201ENST00000641778 930 ntBASIC20.27■□□□□ 0.84
PCDH15Q96QU1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PCDH15Q96QU1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.27■□□□□ 0.83
PCDH15Q96QU1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms