Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PROM2Q8N271 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PROM2Q8N271 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
PROM2Q8N271 KRT8P9-201ENST00000558927 1449 ntBASIC26.66■■□□□ 1.86
PROM2Q8N271 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PROM2Q8N271 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PROM2Q8N271 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
PROM2Q8N271 AC007322.3-201ENST00000426526 701 ntBASIC26.66■■□□□ 1.86
PROM2Q8N271 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC26.66■■□□□ 1.86
PROM2Q8N271 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PROM2Q8N271 AC006557.6-201ENST00000623071 864 ntBASIC26.66■■□□□ 1.86
PROM2Q8N271 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.66■■□□□ 1.86
PROM2Q8N271 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.66■■□□□ 1.86
PROM2Q8N271 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PROM2Q8N271 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.66■■□□□ 1.86
PROM2Q8N271 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PROM2Q8N271 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.65■■□□□ 1.86
PROM2Q8N271 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PROM2Q8N271 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PROM2Q8N271 GGT1-206ENST00000404223 952 ntTSL 2 BASIC26.65■■□□□ 1.86
PROM2Q8N271 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.65■■□□□ 1.86
PROM2Q8N271 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.65■■□□□ 1.86
PROM2Q8N271 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PROM2Q8N271 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PROM2Q8N271 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PROM2Q8N271 AC087633.2-202ENST00000565166 1439 ntBASIC26.65■■□□□ 1.86
PROM2Q8N271 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PROM2Q8N271 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
PROM2Q8N271 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC26.64■■□□□ 1.86
PROM2Q8N271 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PROM2Q8N271 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC26.64■■□□□ 1.86
PROM2Q8N271 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.64■■□□□ 1.86
PROM2Q8N271 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC26.64■■□□□ 1.86
PROM2Q8N271 AC005363.2-201ENST00000618631 242 ntBASIC26.64■■□□□ 1.86
PROM2Q8N271 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PROM2Q8N271 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PROM2Q8N271 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PROM2Q8N271 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PROM2Q8N271 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.63■■□□□ 1.85
PROM2Q8N271 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC26.63■■□□□ 1.85
PROM2Q8N271 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
PROM2Q8N271 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.63■■□□□ 1.85
PROM2Q8N271 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC26.63■■□□□ 1.85
PROM2Q8N271 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PROM2Q8N271 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
PROM2Q8N271 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.63■■□□□ 1.85
PROM2Q8N271 C11orf96-202ENST00000528572 1834 ntBASIC26.62■■□□□ 1.85
PROM2Q8N271 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PROM2Q8N271 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PROM2Q8N271 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.62■■□□□ 1.85
PROM2Q8N271 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
PROM2Q8N271 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PROM2Q8N271 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.62■■□□□ 1.85
PROM2Q8N271 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PROM2Q8N271 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PROM2Q8N271 CRAT-202ENST00000393384 973 ntTSL 2 BASIC26.62■■□□□ 1.85
PROM2Q8N271 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
PROM2Q8N271 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.62■■□□□ 1.85
PROM2Q8N271 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.62■■□□□ 1.85
PROM2Q8N271 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PROM2Q8N271 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC26.62■■□□□ 1.85
PROM2Q8N271 AC005829.2-201ENST00000571422 1056 ntBASIC26.62■■□□□ 1.85
PROM2Q8N271 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PROM2Q8N271 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.62■■□□□ 1.85
PROM2Q8N271 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
PROM2Q8N271 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.62■■□□□ 1.85
PROM2Q8N271 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.61■■□□□ 1.85
PROM2Q8N271 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.61■■□□□ 1.85
PROM2Q8N271 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.61■■□□□ 1.85
PROM2Q8N271 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PROM2Q8N271 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PROM2Q8N271 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PROM2Q8N271 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
PROM2Q8N271 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.61■■□□□ 1.85
PROM2Q8N271 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC26.61■■□□□ 1.85
PROM2Q8N271 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.61■■□□□ 1.85
PROM2Q8N271 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
PROM2Q8N271 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
PROM2Q8N271 AC139530.1-201ENST00000575312 1977 ntBASIC26.6■■□□□ 1.85
PROM2Q8N271 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PROM2Q8N271 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PROM2Q8N271 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
PROM2Q8N271 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PROM2Q8N271 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.6■■□□□ 1.85
PROM2Q8N271 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC26.6■■□□□ 1.85
PROM2Q8N271 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC26.6■■□□□ 1.85
PROM2Q8N271 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC26.6■■□□□ 1.85
PROM2Q8N271 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
PROM2Q8N271 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.6■■□□□ 1.85
PROM2Q8N271 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.6■■□□□ 1.85
PROM2Q8N271 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PROM2Q8N271 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PROM2Q8N271 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PROM2Q8N271 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
PROM2Q8N271 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
PROM2Q8N271 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.59■■□□□ 1.85
PROM2Q8N271 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.59■■□□□ 1.85
PROM2Q8N271 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.59■■□□□ 1.85
PROM2Q8N271 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PROM2Q8N271 AC073508.3-201ENST00000619697 1419 ntBASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms