Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX60Q8IY21 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX60Q8IY21 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.74■■□□□ 1.71
DDX60Q8IY21 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.74■■□□□ 1.71
DDX60Q8IY21 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX60Q8IY21 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX60Q8IY21 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX60Q8IY21 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.74■■□□□ 1.71
DDX60Q8IY21 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.74■■□□□ 1.71
DDX60Q8IY21 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.74■■□□□ 1.71
DDX60Q8IY21 AL117328.2-201ENST00000624617 1940 ntBASIC25.74■■□□□ 1.71
DDX60Q8IY21 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX60Q8IY21 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
DDX60Q8IY21 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.73■■□□□ 1.71
DDX60Q8IY21 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX60Q8IY21 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC25.73■■□□□ 1.71
DDX60Q8IY21 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX60Q8IY21 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
DDX60Q8IY21 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
DDX60Q8IY21 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
DDX60Q8IY21 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.72■■□□□ 1.71
DDX60Q8IY21 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX60Q8IY21 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
DDX60Q8IY21 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX60Q8IY21 KRT18P68-201ENST00000392293 1000 ntBASIC25.72■■□□□ 1.71
DDX60Q8IY21 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
DDX60Q8IY21 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
DDX60Q8IY21 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.72■■□□□ 1.71
DDX60Q8IY21 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX60Q8IY21 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
DDX60Q8IY21 SOX15-203ENST00000570788 1093 ntBASIC25.72■■□□□ 1.71
DDX60Q8IY21 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.72■■□□□ 1.71
DDX60Q8IY21 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
DDX60Q8IY21 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.72■■□□□ 1.71
DDX60Q8IY21 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.72■■□□□ 1.71
DDX60Q8IY21 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.72■■□□□ 1.71
DDX60Q8IY21 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.71■■□□□ 1.71
DDX60Q8IY21 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.71■■□□□ 1.71
DDX60Q8IY21 AL356652.1-201ENST00000615962 565 ntBASIC25.71■■□□□ 1.71
DDX60Q8IY21 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.71■■□□□ 1.71
DDX60Q8IY21 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
DDX60Q8IY21 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
DDX60Q8IY21 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.71■■□□□ 1.71
DDX60Q8IY21 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC25.71■■□□□ 1.71
DDX60Q8IY21 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.71■■□□□ 1.71
DDX60Q8IY21 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX60Q8IY21 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC25.71■■□□□ 1.71
DDX60Q8IY21 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
DDX60Q8IY21 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
DDX60Q8IY21 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC25.7■■□□□ 1.7
DDX60Q8IY21 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.7■■□□□ 1.7
DDX60Q8IY21 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
DDX60Q8IY21 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX60Q8IY21 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX60Q8IY21 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX60Q8IY21 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.7■■□□□ 1.7
DDX60Q8IY21 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.69■■□□□ 1.7
DDX60Q8IY21 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
DDX60Q8IY21 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.69■■□□□ 1.7
DDX60Q8IY21 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX60Q8IY21 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX60Q8IY21 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX60Q8IY21 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
DDX60Q8IY21 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
DDX60Q8IY21 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX60Q8IY21 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX60Q8IY21 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
DDX60Q8IY21 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.69■■□□□ 1.7
DDX60Q8IY21 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX60Q8IY21 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX60Q8IY21 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
DDX60Q8IY21 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
DDX60Q8IY21 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
DDX60Q8IY21 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.68■■□□□ 1.7
DDX60Q8IY21 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX60Q8IY21 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
DDX60Q8IY21 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX60Q8IY21 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX60Q8IY21 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX60Q8IY21 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.68■■□□□ 1.7
DDX60Q8IY21 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.68■■□□□ 1.7
DDX60Q8IY21 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC25.68■■□□□ 1.7
DDX60Q8IY21 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.68■■□□□ 1.7
DDX60Q8IY21 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
DDX60Q8IY21 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.67■■□□□ 1.7
DDX60Q8IY21 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.67■■□□□ 1.7
DDX60Q8IY21 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms