Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 AC008894.3-201ENST00000624324 3103 ntBASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDPF1Q6NVV7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDPF1Q6NVV7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDPF1Q6NVV7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CDPF1Q6NVV7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 MIR4787-201ENST00000607364 84 ntBASIC15.63■□□□□ 0.09
CDPF1Q6NVV7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms