Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 GCSHP5-201ENST00000443090 522 ntBASIC21.75■■□□□ 1.07
TPGS2Q68CL5 PNMA6B-201ENST00000538162 1200 ntBASIC21.75■■□□□ 1.07
TPGS2Q68CL5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.75■■□□□ 1.07
TPGS2Q68CL5 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.75■■□□□ 1.07
TPGS2Q68CL5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPGS2Q68CL5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TPGS2Q68CL5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TPGS2Q68CL5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPGS2Q68CL5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.75■■□□□ 1.07
TPGS2Q68CL5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TPGS2Q68CL5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.74■■□□□ 1.07
TPGS2Q68CL5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 AC087633.2-202ENST00000565166 1439 ntBASIC21.73■■□□□ 1.07
TPGS2Q68CL5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 PGM5P4-201ENST00000421970 445 ntBASIC21.73■■□□□ 1.07
TPGS2Q68CL5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 RPS2P52-201ENST00000469610 820 ntBASIC21.73■■□□□ 1.07
TPGS2Q68CL5 AC093827.2-201ENST00000512654 315 ntBASIC21.73■■□□□ 1.07
TPGS2Q68CL5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 AC008403.3-201ENST00000598924 454 ntBASIC21.73■■□□□ 1.07
TPGS2Q68CL5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 AC073648.6-201ENST00000641589 218 ntBASIC21.73■■□□□ 1.07
TPGS2Q68CL5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 AC092368.3-202ENST00000574180 1591 ntBASIC21.73■■□□□ 1.07
TPGS2Q68CL5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.73■■□□□ 1.07
TPGS2Q68CL5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 UNC93B4-201ENST00000505679 747 ntBASIC21.72■■□□□ 1.07
TPGS2Q68CL5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.72■■□□□ 1.07
TPGS2Q68CL5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.72■■□□□ 1.07
TPGS2Q68CL5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 AP006294.2-201ENST00000641667 209 ntBASIC21.71■■□□□ 1.07
TPGS2Q68CL5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPGS2Q68CL5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 AC142381.4-202ENST00000563973 229 ntBASIC21.7■■□□□ 1.06
TPGS2Q68CL5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.7■■□□□ 1.06
TPGS2Q68CL5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPGS2Q68CL5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPGS2Q68CL5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.69■■□□□ 1.06
TPGS2Q68CL5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPGS2Q68CL5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms