Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H2P55055 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H2P55055 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H2P55055 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.5■□□□□ 0.71
NR1H2P55055 AC233992.3-201ENST00000607491 485 ntBASIC19.5■□□□□ 0.71
NR1H2P55055 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H2P55055 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H2P55055 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
NR1H2P55055 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H2P55055 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.5■□□□□ 0.71
NR1H2P55055 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H2P55055 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H2P55055 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.49■□□□□ 0.71
NR1H2P55055 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.49■□□□□ 0.71
NR1H2P55055 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
NR1H2P55055 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.49■□□□□ 0.71
NR1H2P55055 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.49■□□□□ 0.71
NR1H2P55055 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.49■□□□□ 0.71
NR1H2P55055 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NR1H2P55055 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NR1H2P55055 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.49■□□□□ 0.71
NR1H2P55055 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H2P55055 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NR1H2P55055 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.48■□□□□ 0.71
NR1H2P55055 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.48■□□□□ 0.71
NR1H2P55055 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.48■□□□□ 0.71
NR1H2P55055 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.48■□□□□ 0.71
NR1H2P55055 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.48■□□□□ 0.71
NR1H2P55055 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.48■□□□□ 0.71
NR1H2P55055 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.48■□□□□ 0.71
NR1H2P55055 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NR1H2P55055 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H2P55055 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.48■□□□□ 0.71
NR1H2P55055 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NR1H2P55055 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 IRS3P-201ENST00000223076 1006 ntBASIC19.47■□□□□ 0.71
NR1H2P55055 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
NR1H2P55055 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.47■□□□□ 0.71
NR1H2P55055 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.47■□□□□ 0.71
NR1H2P55055 pRNA.6-201ENST00000610482 90 ntBASIC19.47■□□□□ 0.71
NR1H2P55055 pRNA.5-201ENST00000612139 90 ntBASIC19.47■□□□□ 0.71
NR1H2P55055 pRNA.11-201ENST00000618423 90 ntBASIC19.47■□□□□ 0.71
NR1H2P55055 pRNA.13-201ENST00000619112 90 ntBASIC19.47■□□□□ 0.71
NR1H2P55055 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.47■□□□□ 0.71
NR1H2P55055 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NR1H2P55055 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H2P55055 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.47■□□□□ 0.71
NR1H2P55055 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
NR1H2P55055 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.47■□□□□ 0.71
NR1H2P55055 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.46■□□□□ 0.71
NR1H2P55055 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H2P55055 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H2P55055 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NR1H2P55055 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H2P55055 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H2P55055 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H2P55055 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.46■□□□□ 0.71
NR1H2P55055 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H2P55055 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
NR1H2P55055 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H2P55055 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H2P55055 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.46■□□□□ 0.71
NR1H2P55055 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.46■□□□□ 0.71
NR1H2P55055 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.46■□□□□ 0.71
NR1H2P55055 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
NR1H2P55055 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms