Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC112907.3-201ENST00000577781 2400 ntBASIC17.96■□□□□ 0.46
GDNFP39905 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GDNFP39905 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
GDNFP39905 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.95■□□□□ 0.46
GDNFP39905 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
GDNFP39905 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GDNFP39905 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.95■□□□□ 0.46
GDNFP39905 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GDNFP39905 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.95■□□□□ 0.46
GDNFP39905 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.95■□□□□ 0.46
GDNFP39905 AC110285.6-201ENST00000617652 491 ntBASIC17.95■□□□□ 0.46
GDNFP39905 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
GDNFP39905 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GDNFP39905 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GDNFP39905 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDNFP39905 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.94■□□□□ 0.46
GDNFP39905 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDNFP39905 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDNFP39905 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDNFP39905 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.94■□□□□ 0.46
GDNFP39905 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDNFP39905 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDNFP39905 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
GDNFP39905 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDNFP39905 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.94■□□□□ 0.46
GDNFP39905 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GDNFP39905 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GDNFP39905 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
GDNFP39905 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.94■□□□□ 0.46
GDNFP39905 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
GDNFP39905 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
GDNFP39905 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.94■□□□□ 0.46
GDNFP39905 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.94■□□□□ 0.46
GDNFP39905 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
GDNFP39905 AC135279.3-201ENST00000610945 1311 ntBASIC17.94■□□□□ 0.46
GDNFP39905 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.93■□□□□ 0.46
GDNFP39905 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GDNFP39905 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDNFP39905 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDNFP39905 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
GDNFP39905 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.93■□□□□ 0.46
GDNFP39905 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GDNFP39905 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.93■□□□□ 0.46
GDNFP39905 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.93■□□□□ 0.46
GDNFP39905 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
GDNFP39905 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDNFP39905 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
GDNFP39905 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GDNFP39905 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
GDNFP39905 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.92■□□□□ 0.46
GDNFP39905 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
GDNFP39905 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 SMG8-203ENST00000578922 2178 ntBASIC17.92■□□□□ 0.46
GDNFP39905 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.92■□□□□ 0.46
GDNFP39905 PBX2P1-201ENST00000493219 1291 ntBASIC17.92■□□□□ 0.46
GDNFP39905 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.92■□□□□ 0.46
GDNFP39905 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.92■□□□□ 0.46
GDNFP39905 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDNFP39905 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.92■□□□□ 0.46
GDNFP39905 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDNFP39905 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDNFP39905 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDNFP39905 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDNFP39905 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
GDNFP39905 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDNFP39905 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.91■□□□□ 0.46
GDNFP39905 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
GDNFP39905 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.91■□□□□ 0.46
GDNFP39905 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.91■□□□□ 0.46
GDNFP39905 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.91■□□□□ 0.46
GDNFP39905 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.91■□□□□ 0.46
GDNFP39905 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDNFP39905 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDNFP39905 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.91■□□□□ 0.46
GDNFP39905 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GDNFP39905 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
GDNFP39905 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms