Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 AC061975.6-201ENST00000579045 1553 ntBASIC19.2■□□□□ 0.66
TNFRSF1BP20333 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 AL512408.1-201ENST00000569378 2000 ntBASIC19.2■□□□□ 0.66
TNFRSF1BP20333 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 AC008406.3-201ENST00000620001 1374 ntBASIC19.19■□□□□ 0.66
TNFRSF1BP20333 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNFRSF1BP20333 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 AF213884.3-201ENST00000563833 479 ntBASIC19.18■□□□□ 0.66
TNFRSF1BP20333 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFRSF1BP20333 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.17■□□□□ 0.66
TNFRSF1BP20333 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.17■□□□□ 0.66
TNFRSF1BP20333 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 MIR572-201ENST00000384983 95 ntBASIC19.17■□□□□ 0.66
TNFRSF1BP20333 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 AC106739.1-201ENST00000617035 715 ntBASIC19.17■□□□□ 0.66
TNFRSF1BP20333 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1BP20333 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 AL121603.2-201ENST00000557373 2117 ntBASIC19.16■□□□□ 0.66
TNFRSF1BP20333 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1BP20333 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 EEF1DP3-203ENST00000566025 782 ntBASIC19.15■□□□□ 0.66
TNFRSF1BP20333 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms