Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCG2P13521 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
SCG2P13521 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCG2P13521 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCG2P13521 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCG2P13521 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.84■■□□□ 1.41
SCG2P13521 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.84■■□□□ 1.41
SCG2P13521 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SCG2P13521 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCG2P13521 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.83■■□□□ 1.41
SCG2P13521 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.83■■□□□ 1.41
SCG2P13521 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.83■■□□□ 1.41
SCG2P13521 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCG2P13521 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCG2P13521 AC007322.3-201ENST00000426526 701 ntBASIC23.83■■□□□ 1.41
SCG2P13521 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.83■■□□□ 1.41
SCG2P13521 AC026185.1-201ENST00000445748 174 ntBASIC23.83■■□□□ 1.41
SCG2P13521 CDV3P1-201ENST00000471403 739 ntBASIC23.83■■□□□ 1.41
SCG2P13521 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
SCG2P13521 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCG2P13521 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCG2P13521 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCG2P13521 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCG2P13521 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.83■■□□□ 1.4
SCG2P13521 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
SCG2P13521 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCG2P13521 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCG2P13521 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.82■■□□□ 1.4
SCG2P13521 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCG2P13521 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SCG2P13521 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SCG2P13521 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.82■■□□□ 1.4
SCG2P13521 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.82■■□□□ 1.4
SCG2P13521 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.82■■□□□ 1.4
SCG2P13521 AC016405.3-201ENST00000607710 860 ntBASIC23.82■■□□□ 1.4
SCG2P13521 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.82■■□□□ 1.4
SCG2P13521 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.82■■□□□ 1.4
SCG2P13521 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.82■■□□□ 1.4
SCG2P13521 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.82■■□□□ 1.4
SCG2P13521 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
SCG2P13521 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCG2P13521 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SCG2P13521 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCG2P13521 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCG2P13521 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.81■■□□□ 1.4
SCG2P13521 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCG2P13521 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.81■■□□□ 1.4
SCG2P13521 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.81■■□□□ 1.4
SCG2P13521 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCG2P13521 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SCG2P13521 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCG2P13521 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCG2P13521 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.81■■□□□ 1.4
SCG2P13521 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.81■■□□□ 1.4
SCG2P13521 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCG2P13521 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCG2P13521 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCG2P13521 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCG2P13521 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.8■■□□□ 1.4
SCG2P13521 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCG2P13521 CYP2T1P-201ENST00000432607 1285 ntBASIC23.8■■□□□ 1.4
SCG2P13521 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.8■■□□□ 1.4
SCG2P13521 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCG2P13521 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCG2P13521 AC005181.1-201ENST00000604782 1256 ntBASIC23.8■■□□□ 1.4
SCG2P13521 FAM21FP-204ENST00000608637 956 ntBASIC23.8■■□□□ 1.4
SCG2P13521 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.8■■□□□ 1.4
SCG2P13521 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCG2P13521 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCG2P13521 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCG2P13521 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCG2P13521 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCG2P13521 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.79■■□□□ 1.4
SCG2P13521 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCG2P13521 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.79■■□□□ 1.4
SCG2P13521 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCG2P13521 HLA-L-209ENST00000420110 1011 ntBASIC23.79■■□□□ 1.4
SCG2P13521 CROCCP5-201ENST00000436658 830 ntBASIC23.79■■□□□ 1.4
SCG2P13521 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SCG2P13521 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.79■■□□□ 1.4
SCG2P13521 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCG2P13521 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCG2P13521 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCG2P13521 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCG2P13521 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCG2P13521 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCG2P13521 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCG2P13521 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.78■■□□□ 1.4
SCG2P13521 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.78■■□□□ 1.4
SCG2P13521 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.78■■□□□ 1.4
SCG2P13521 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.78■■□□□ 1.4
SCG2P13521 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCG2P13521 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.78■■□□□ 1.4
SCG2P13521 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
SCG2P13521 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.78■■□□□ 1.4
SCG2P13521 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SCG2P13521 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.77■■□□□ 1.4
SCG2P13521 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.77■■□□□ 1.4
SCG2P13521 AC006128.1-201ENST00000624704 1661 ntBASIC23.77■■□□□ 1.4
SCG2P13521 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms