Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLUP10909 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLUP10909 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLUP10909 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLUP10909 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLUP10909 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLUP10909 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLUP10909 AC027702.1-201ENST00000563810 1770 ntBASIC18.63■□□□□ 0.57
CLUP10909 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.63■□□□□ 0.57
CLUP10909 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLUP10909 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLUP10909 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.62■□□□□ 0.57
CLUP10909 AC027682.1-201ENST00000562846 899 ntBASIC18.62■□□□□ 0.57
CLUP10909 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 BX005040.4-201ENST00000637145 1518 ntBASIC18.62■□□□□ 0.57
CLUP10909 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.62■□□□□ 0.57
CLUP10909 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLUP10909 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLUP10909 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLUP10909 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLUP10909 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.61■□□□□ 0.57
CLUP10909 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLUP10909 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLUP10909 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.61■□□□□ 0.57
CLUP10909 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CLUP10909 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.61■□□□□ 0.57
CLUP10909 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CLUP10909 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLUP10909 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.61■□□□□ 0.57
CLUP10909 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLUP10909 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLUP10909 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.61■□□□□ 0.57
CLUP10909 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLUP10909 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.61■□□□□ 0.57
CLUP10909 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.61■□□□□ 0.57
CLUP10909 AP001330.3-201ENST00000520123 633 ntBASIC18.61■□□□□ 0.57
CLUP10909 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.61■□□□□ 0.57
CLUP10909 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
CLUP10909 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLUP10909 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.61■□□□□ 0.57
CLUP10909 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLUP10909 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLUP10909 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLUP10909 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CLUP10909 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLUP10909 AC008406.3-201ENST00000620001 1374 ntBASIC18.6■□□□□ 0.57
CLUP10909 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.6■□□□□ 0.57
CLUP10909 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLUP10909 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.6■□□□□ 0.57
CLUP10909 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.6■□□□□ 0.57
CLUP10909 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLUP10909 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLUP10909 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLUP10909 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLUP10909 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLUP10909 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.59■□□□□ 0.57
CLUP10909 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLUP10909 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.59■□□□□ 0.57
CLUP10909 AC007225.1-201ENST00000566331 1836 ntBASIC18.59■□□□□ 0.57
CLUP10909 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLUP10909 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.59■□□□□ 0.57
CLUP10909 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.59■□□□□ 0.57
CLUP10909 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLUP10909 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.59■□□□□ 0.57
CLUP10909 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLUP10909 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLUP10909 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLUP10909 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLUP10909 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLUP10909 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLUP10909 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLUP10909 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
CLUP10909 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLUP10909 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLUP10909 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.58■□□□□ 0.57
CLUP10909 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLUP10909 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLUP10909 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.58■□□□□ 0.57
CLUP10909 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.58■□□□□ 0.57
CLUP10909 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLUP10909 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLUP10909 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.58■□□□□ 0.57
CLUP10909 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLUP10909 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.58■□□□□ 0.56
CLUP10909 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.58■□□□□ 0.56
CLUP10909 AC106739.1-201ENST00000617035 715 ntBASIC18.58■□□□□ 0.56
CLUP10909 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.58■□□□□ 0.56
CLUP10909 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLUP10909 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLUP10909 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms