Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP2P08253 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.88■□□□□ 0.93
MMP2P08253 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
MMP2P08253 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP2P08253 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP2P08253 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
MMP2P08253 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP2P08253 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP2P08253 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
MMP2P08253 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
MMP2P08253 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP2P08253 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP2P08253 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP2P08253 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
MMP2P08253 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MMP2P08253 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.86■□□□□ 0.93
MMP2P08253 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.86■□□□□ 0.93
MMP2P08253 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
MMP2P08253 AC080038.1-201ENST00000611274 1154 ntBASIC20.86■□□□□ 0.93
MMP2P08253 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.86■□□□□ 0.93
MMP2P08253 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
MMP2P08253 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.86■□□□□ 0.93
MMP2P08253 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 AC068338.2-201ENST00000563278 1430 ntBASIC20.86■□□□□ 0.93
MMP2P08253 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP2P08253 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.86■□□□□ 0.93
MMP2P08253 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.85■□□□□ 0.93
MMP2P08253 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.85■□□□□ 0.93
MMP2P08253 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
MMP2P08253 AC007322.3-201ENST00000426526 701 ntBASIC20.85■□□□□ 0.93
MMP2P08253 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.85■□□□□ 0.93
MMP2P08253 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.85■□□□□ 0.93
MMP2P08253 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.85■□□□□ 0.93
MMP2P08253 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 AL591742.1-201ENST00000604433 565 ntBASIC20.85■□□□□ 0.93
MMP2P08253 AC016405.3-201ENST00000607710 860 ntBASIC20.85■□□□□ 0.93
MMP2P08253 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.85■□□□□ 0.93
MMP2P08253 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.85■□□□□ 0.93
MMP2P08253 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MMP2P08253 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.85■□□□□ 0.93
MMP2P08253 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP2P08253 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
MMP2P08253 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP2P08253 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP2P08253 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP2P08253 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP2P08253 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP2P08253 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.84■□□□□ 0.93
MMP2P08253 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP2P08253 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
MMP2P08253 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.84■□□□□ 0.93
MMP2P08253 CDCA4P2-201ENST00000441182 718 ntBASIC20.84■□□□□ 0.93
MMP2P08253 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.84■□□□□ 0.93
MMP2P08253 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.84■□□□□ 0.93
MMP2P08253 RAP2CP1-201ENST00000605103 478 ntBASIC20.84■□□□□ 0.93
MMP2P08253 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.84■□□□□ 0.93
MMP2P08253 AC073111.5-205ENST00000641717 521 ntBASIC20.84■□□□□ 0.93
MMP2P08253 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.84■□□□□ 0.93
MMP2P08253 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP2P08253 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MMP2P08253 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.84■□□□□ 0.93
MMP2P08253 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP2P08253 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.84■□□□□ 0.93
MMP2P08253 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP2P08253 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP2P08253 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MMP2P08253 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MMP2P08253 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP2P08253 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MMP2P08253 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
MMP2P08253 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms