Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
LCMT2O60294 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.79■□□□□ 0.76
LCMT2O60294 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.79■□□□□ 0.76
LCMT2O60294 AC007322.4-201ENST00000509611 723 ntBASIC19.79■□□□□ 0.76
LCMT2O60294 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.79■□□□□ 0.76
LCMT2O60294 RAP2CP1-201ENST00000605103 478 ntBASIC19.79■□□□□ 0.76
LCMT2O60294 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.79■□□□□ 0.76
LCMT2O60294 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.79■□□□□ 0.76
LCMT2O60294 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.79■□□□□ 0.76
LCMT2O60294 AC116050.2-201ENST00000612102 1779 ntBASIC19.79■□□□□ 0.76
LCMT2O60294 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.79■□□□□ 0.76
LCMT2O60294 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.79■□□□□ 0.76
LCMT2O60294 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.79■□□□□ 0.76
LCMT2O60294 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
LCMT2O60294 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.78■□□□□ 0.76
LCMT2O60294 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.78■□□□□ 0.76
LCMT2O60294 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LCMT2O60294 AC011484.1-201ENST00000377652 1995 ntBASIC19.78■□□□□ 0.76
LCMT2O60294 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LCMT2O60294 AC007322.1-201ENST00000426983 750 ntBASIC19.78■□□□□ 0.76
LCMT2O60294 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.78■□□□□ 0.76
LCMT2O60294 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.78■□□□□ 0.76
LCMT2O60294 AL591742.1-201ENST00000604433 565 ntBASIC19.78■□□□□ 0.76
LCMT2O60294 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.78■□□□□ 0.76
LCMT2O60294 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
LCMT2O60294 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LCMT2O60294 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LCMT2O60294 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCMT2O60294 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LCMT2O60294 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCMT2O60294 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LCMT2O60294 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LCMT2O60294 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LCMT2O60294 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LCMT2O60294 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
LCMT2O60294 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCMT2O60294 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCMT2O60294 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.77■□□□□ 0.76
LCMT2O60294 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LCMT2O60294 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.77■□□□□ 0.76
LCMT2O60294 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LCMT2O60294 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.77■□□□□ 0.76
LCMT2O60294 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.77■□□□□ 0.76
LCMT2O60294 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LCMT2O60294 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LCMT2O60294 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LCMT2O60294 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCMT2O60294 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LCMT2O60294 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LCMT2O60294 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LCMT2O60294 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.76■□□□□ 0.75
LCMT2O60294 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.76■□□□□ 0.75
LCMT2O60294 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.76■□□□□ 0.75
LCMT2O60294 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LCMT2O60294 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.76■□□□□ 0.75
LCMT2O60294 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.76■□□□□ 0.75
LCMT2O60294 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 AC016405.3-201ENST00000607710 860 ntBASIC19.76■□□□□ 0.75
LCMT2O60294 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
LCMT2O60294 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.76■□□□□ 0.75
LCMT2O60294 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
LCMT2O60294 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCMT2O60294 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCMT2O60294 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LCMT2O60294 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCMT2O60294 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.75■□□□□ 0.75
LCMT2O60294 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.75■□□□□ 0.75
LCMT2O60294 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCMT2O60294 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCMT2O60294 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LCMT2O60294 AC026185.1-201ENST00000445748 174 ntBASIC19.75■□□□□ 0.75
LCMT2O60294 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCMT2O60294 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.75■□□□□ 0.75
LCMT2O60294 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCMT2O60294 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LCMT2O60294 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms