Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF11BO00300 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 AL512408.1-201ENST00000569378 2000 ntBASIC19.1■□□□□ 0.65
TNFRSF11BO00300 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 AC055733.4-201ENST00000638462 1354 ntBASIC19.1■□□□□ 0.65
TNFRSF11BO00300 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF11BO00300 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 AL162377.1-201ENST00000618844 1793 ntBASIC19.09■□□□□ 0.65
TNFRSF11BO00300 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 AC112907.3-201ENST00000577781 2400 ntBASIC19.09■□□□□ 0.65
TNFRSF11BO00300 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.09■□□□□ 0.65
TNFRSF11BO00300 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.08■□□□□ 0.65
TNFRSF11BO00300 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.08■□□□□ 0.65
TNFRSF11BO00300 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.08■□□□□ 0.65
TNFRSF11BO00300 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFRSF11BO00300 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TNFRSF11BO00300 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
TNFRSF11BO00300 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TNFRSF11BO00300 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFRSF11BO00300 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 BX842568.3-201ENST00000418104 571 ntBASIC19.08■□□□□ 0.64
TNFRSF11BO00300 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFRSF11BO00300 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFRSF11BO00300 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 BX005040.4-201ENST00000637145 1518 ntBASIC19.06■□□□□ 0.64
TNFRSF11BO00300 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 AL356441.2-201ENST00000443009 864 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms