Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV5A0A0B4J249 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV5A0A0B4J249 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV5A0A0B4J249 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 AL162377.1-201ENST00000618844 1793 ntBASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV5A0A0B4J249 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms