Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 AC011484.1-201ENST00000377652 1995 ntBASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
ECHDC1Q9NTX5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
ECHDC1Q9NTX5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
ECHDC1Q9NTX5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.29■■□□□ 1.64
ECHDC1Q9NTX5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ECHDC1Q9NTX5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
ECHDC1Q9NTX5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.29■■□□□ 1.64
ECHDC1Q9NTX5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.29■■□□□ 1.64
ECHDC1Q9NTX5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
ECHDC1Q9NTX5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 AC073111.5-205ENST00000641717 521 ntBASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 AC116050.2-201ENST00000612102 1779 ntBASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ECHDC1Q9NTX5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 AC231657.2-201ENST00000624556 255 ntBASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ECHDC1Q9NTX5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 CDCA4P2-201ENST00000441182 718 ntBASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 AL591742.1-201ENST00000604433 565 ntBASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ECHDC1Q9NTX5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 AC068338.2-201ENST00000563278 1430 ntBASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ECHDC1Q9NTX5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ECHDC1Q9NTX5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.23■■□□□ 1.63
ECHDC1Q9NTX5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
ECHDC1Q9NTX5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ECHDC1Q9NTX5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms