Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 AC009102.2-201ENST00000606772 1639 ntBASIC18.77■□□□□ 0.6
HMG20AQ9NP66 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMG20AQ9NP66 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMG20AQ9NP66 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMG20AQ9NP66 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 TNXA-203ENST00000507684 2038 ntBASIC18.76■□□□□ 0.59
HMG20AQ9NP66 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMG20AQ9NP66 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 DUX4L4-201ENST00000566884 1269 ntBASIC18.75■□□□□ 0.59
HMG20AQ9NP66 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 AC006128.1-201ENST00000624704 1661 ntBASIC18.75■□□□□ 0.59
HMG20AQ9NP66 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20AQ9NP66 C17orf82-201ENST00000623772 1530 ntBASIC18.74■□□□□ 0.59
HMG20AQ9NP66 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20AQ9NP66 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 UNC93B8-201ENST00000511903 705 ntBASIC18.73■□□□□ 0.59
HMG20AQ9NP66 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20AQ9NP66 AP000974.1-201ENST00000623909 2387 ntBASIC18.73■□□□□ 0.59
HMG20AQ9NP66 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 AC116562.4-201ENST00000641316 2276 ntBASIC18.72■□□□□ 0.59
HMG20AQ9NP66 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20AQ9NP66 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms