Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 RARRES2P11-201ENST00000635158 484 ntBASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 KRT87P-202ENST00000534226 1464 ntBASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SUDS3Q9H7L9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 AC092667.1-201ENST00000434301 2586 ntBASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 KRT19P1-201ENST00000405746 1186 ntBASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
SUDS3Q9H7L9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUDS3Q9H7L9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SUDS3Q9H7L9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SUDS3Q9H7L9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SUDS3Q9H7L9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SUDS3Q9H7L9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.08■□□□□ 0.97
SUDS3Q9H7L9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.08■□□□□ 0.97
SUDS3Q9H7L9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.08■□□□□ 0.97
SUDS3Q9H7L9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SUDS3Q9H7L9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.08■□□□□ 0.96
SUDS3Q9H7L9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.08■□□□□ 0.96
SUDS3Q9H7L9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
SUDS3Q9H7L9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.08■□□□□ 0.96
SUDS3Q9H7L9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.96
SUDS3Q9H7L9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.08■□□□□ 0.96
SUDS3Q9H7L9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.07■□□□□ 0.96
SUDS3Q9H7L9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms