Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 AC073314.1-201ENST00000568729 2216 ntBASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
POLR2J3Q9H1A7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 AF213884.3-201ENST00000563833 479 ntBASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 AL354811.1-201ENST00000610286 706 ntBASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 AC121338.2-201ENST00000622535 1744 ntBASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR2J3Q9H1A7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 AL121603.2-201ENST00000557373 2117 ntBASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
POLR2J3Q9H1A7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 AC110285.6-201ENST00000617652 491 ntBASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 AL136967.2-201ENST00000623968 743 ntBASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR2J3Q9H1A7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
POLR2J3Q9H1A7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
POLR2J3Q9H1A7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
POLR2J3Q9H1A7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms