Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.84■■□□□ 1.09
SMOQ99835 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SMOQ99835 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.84■■□□□ 1.09
SMOQ99835 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMOQ99835 AC026310.3-201ENST00000625186 2373 ntBASIC21.84■■□□□ 1.09
SMOQ99835 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
SMOQ99835 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMOQ99835 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SMOQ99835 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMOQ99835 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SMOQ99835 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMOQ99835 AC007322.3-201ENST00000426526 701 ntBASIC21.83■■□□□ 1.09
SMOQ99835 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMOQ99835 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMOQ99835 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMOQ99835 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SMOQ99835 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMOQ99835 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMOQ99835 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
SMOQ99835 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMOQ99835 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.83■■□□□ 1.08
SMOQ99835 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
SMOQ99835 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMOQ99835 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMOQ99835 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.82■■□□□ 1.08
SMOQ99835 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMOQ99835 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMOQ99835 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMOQ99835 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.82■■□□□ 1.08
SMOQ99835 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMOQ99835 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.82■■□□□ 1.08
SMOQ99835 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.82■■□□□ 1.08
SMOQ99835 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMOQ99835 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMOQ99835 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMOQ99835 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SMOQ99835 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.82■■□□□ 1.08
SMOQ99835 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMOQ99835 AL049796.1-201ENST00000565336 1766 ntBASIC21.82■■□□□ 1.08
SMOQ99835 AC116050.2-201ENST00000612102 1779 ntBASIC21.82■■□□□ 1.08
SMOQ99835 AC010980.2-201ENST00000587099 1412 ntBASIC21.81■■□□□ 1.08
SMOQ99835 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMOQ99835 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SMOQ99835 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMOQ99835 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMOQ99835 AF106564.1-201ENST00000607058 2553 ntBASIC21.81■■□□□ 1.08
SMOQ99835 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMOQ99835 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.81■■□□□ 1.08
SMOQ99835 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SMOQ99835 AL355802.2-201ENST00000402069 882 ntBASIC21.81■■□□□ 1.08
SMOQ99835 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.81■■□□□ 1.08
SMOQ99835 AL138781.1-201ENST00000566567 1274 ntBASIC21.81■■□□□ 1.08
SMOQ99835 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.81■■□□□ 1.08
SMOQ99835 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
SMOQ99835 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.81■■□□□ 1.08
SMOQ99835 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMOQ99835 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.8■■□□□ 1.08
SMOQ99835 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.8■■□□□ 1.08
SMOQ99835 MKRN4P-201ENST00000444706 1521 ntBASIC21.8■■□□□ 1.08
SMOQ99835 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.8■■□□□ 1.08
SMOQ99835 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SMOQ99835 SLC29A4P1-201ENST00000398760 971 ntBASIC21.8■■□□□ 1.08
SMOQ99835 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.8■■□□□ 1.08
SMOQ99835 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.8■■□□□ 1.08
SMOQ99835 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.8■■□□□ 1.08
SMOQ99835 AC142086.2-201ENST00000569753 217 ntBASIC21.8■■□□□ 1.08
SMOQ99835 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SMOQ99835 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.8■■□□□ 1.08
SMOQ99835 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMOQ99835 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMOQ99835 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMOQ99835 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMOQ99835 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.79■■□□□ 1.08
SMOQ99835 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SMOQ99835 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SMOQ99835 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.79■■□□□ 1.08
SMOQ99835 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.79■■□□□ 1.08
SMOQ99835 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SMOQ99835 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.79■■□□□ 1.08
SMOQ99835 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.79■■□□□ 1.08
SMOQ99835 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.79■■□□□ 1.08
SMOQ99835 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMOQ99835 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMOQ99835 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.79■■□□□ 1.08
SMOQ99835 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.79■■□□□ 1.08
SMOQ99835 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SMOQ99835 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMOQ99835 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMOQ99835 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMOQ99835 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMOQ99835 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMOQ99835 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SMOQ99835 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMOQ99835 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.78■■□□□ 1.08
SMOQ99835 MIPEPP3-201ENST00000412105 444 ntBASIC21.78■■□□□ 1.08
SMOQ99835 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.78■■□□□ 1.08
SMOQ99835 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.78■■□□□ 1.08
SMOQ99835 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.78■■□□□ 1.08
SMOQ99835 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.78■■□□□ 1.08
SMOQ99835 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms