Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC58Q96CX6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC58Q96CX6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC58Q96CX6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC58Q96CX6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 AC055733.4-201ENST00000638462 1354 ntBASIC19.7■□□□□ 0.74
LRRC58Q96CX6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 BX005040.4-201ENST00000637145 1518 ntBASIC19.7■□□□□ 0.74
LRRC58Q96CX6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC58Q96CX6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC58Q96CX6 AC099778.1-201ENST00000568593 1911 ntBASIC19.68■□□□□ 0.74
LRRC58Q96CX6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC58Q96CX6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.67■□□□□ 0.74
LRRC58Q96CX6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.66■□□□□ 0.74
LRRC58Q96CX6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRRC58Q96CX6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 AC011484.1-201ENST00000377652 1995 ntBASIC19.65■□□□□ 0.74
LRRC58Q96CX6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 BX842568.3-201ENST00000418104 571 ntBASIC19.65■□□□□ 0.74
LRRC58Q96CX6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms