Protein–RNA interactions for Protein: Q96A61

TRIM52, Tripartite motif-containing protein 52, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM52Q96A61 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
TRIM52Q96A61 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
TRIM52Q96A61 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
TRIM52Q96A61 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
TRIM52Q96A61 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
TRIM52Q96A61 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TRIM52Q96A61 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TRIM52Q96A61 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TRIM52Q96A61 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
TRIM52Q96A61 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC30.76■■■□□ 2.51
TRIM52Q96A61 FAM21FP-204ENST00000608637 956 ntBASIC30.76■■■□□ 2.51
TRIM52Q96A61 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TRIM52Q96A61 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC30.76■■■□□ 2.51
TRIM52Q96A61 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC30.76■■■□□ 2.51
TRIM52Q96A61 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TRIM52Q96A61 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TRIM52Q96A61 DYM-203ENST00000442713 2147 ntTSL 2 BASIC30.76■■■□□ 2.51
TRIM52Q96A61 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TRIM52Q96A61 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
TRIM52Q96A61 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC30.75■■■□□ 2.51
TRIM52Q96A61 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
TRIM52Q96A61 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
TRIM52Q96A61 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
TRIM52Q96A61 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
TRIM52Q96A61 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.75■■■□□ 2.51
TRIM52Q96A61 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC30.75■■■□□ 2.51
TRIM52Q96A61 PTPA-214ENST00000423100 988 ntTSL 2 BASIC30.75■■■□□ 2.51
TRIM52Q96A61 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC30.75■■■□□ 2.51
TRIM52Q96A61 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC30.75■■■□□ 2.51
TRIM52Q96A61 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
TRIM52Q96A61 CLDN5-201ENST00000403084 2357 ntBASIC30.74■■■□□ 2.51
TRIM52Q96A61 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TRIM52Q96A61 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TRIM52Q96A61 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TRIM52Q96A61 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
TRIM52Q96A61 AC092118.2-201ENST00000613495 667 ntBASIC30.74■■■□□ 2.51
TRIM52Q96A61 TUB-203ENST00000534099 1759 ntTSL 2 BASIC30.74■■■□□ 2.51
TRIM52Q96A61 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC30.73■■■□□ 2.51
TRIM52Q96A61 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TRIM52Q96A61 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.73■■■□□ 2.51
TRIM52Q96A61 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TRIM52Q96A61 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
TRIM52Q96A61 VMO1-204ENST00000441199 741 ntTSL 2 BASIC30.73■■■□□ 2.51
TRIM52Q96A61 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
TRIM52Q96A61 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TRIM52Q96A61 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC30.73■■■□□ 2.51
TRIM52Q96A61 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC30.72■■■□□ 2.51
TRIM52Q96A61 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TRIM52Q96A61 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TRIM52Q96A61 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
TRIM52Q96A61 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TRIM52Q96A61 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.72■■■□□ 2.51
TRIM52Q96A61 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC30.72■■■□□ 2.51
TRIM52Q96A61 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC30.72■■■□□ 2.51
TRIM52Q96A61 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC30.72■■■□□ 2.51
TRIM52Q96A61 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC30.72■■■□□ 2.51
TRIM52Q96A61 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC30.72■■■□□ 2.51
TRIM52Q96A61 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TRIM52Q96A61 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
TRIM52Q96A61 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TRIM52Q96A61 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TRIM52Q96A61 AC007322.3-201ENST00000426526 701 ntBASIC30.71■■■□□ 2.51
TRIM52Q96A61 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.71■■■□□ 2.51
TRIM52Q96A61 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TRIM52Q96A61 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
TRIM52Q96A61 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TRIM52Q96A61 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC30.7■■■□□ 2.51
TRIM52Q96A61 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM52Q96A61 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
TRIM52Q96A61 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM52Q96A61 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC30.7■■■□□ 2.51
TRIM52Q96A61 AC244015.2-201ENST00000616358 1861 ntBASIC30.7■■■□□ 2.51
TRIM52Q96A61 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM52Q96A61 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC30.7■■■□□ 2.51
TRIM52Q96A61 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM52Q96A61 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC30.7■■■□□ 2.51
TRIM52Q96A61 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC30.7■■■□□ 2.51
TRIM52Q96A61 MIR4651-201ENST00000582622 73 ntBASIC30.7■■■□□ 2.51
TRIM52Q96A61 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC30.7■■■□□ 2.51
TRIM52Q96A61 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC30.7■■■□□ 2.5
TRIM52Q96A61 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC30.7■■■□□ 2.5
TRIM52Q96A61 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TRIM52Q96A61 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM52Q96A61 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM52Q96A61 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM52Q96A61 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC30.69■■■□□ 2.5
TRIM52Q96A61 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM52Q96A61 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
TRIM52Q96A61 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM52Q96A61 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC30.69■■■□□ 2.5
TRIM52Q96A61 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM52Q96A61 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM52Q96A61 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM52Q96A61 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC30.69■■■□□ 2.5
TRIM52Q96A61 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM52Q96A61 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM52Q96A61 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC30.68■■■□□ 2.5
TRIM52Q96A61 KRT17P1-201ENST00000399211 1546 ntBASIC30.68■■■□□ 2.5
TRIM52Q96A61 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC30.68■■■□□ 2.5
TRIM52Q96A61 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms