Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC005181.1-201ENST00000604782 1256 ntBASIC21.78■■□□□ 1.08
RNF139Q8WU17 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF139Q8WU17 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF139Q8WU17 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF139Q8WU17 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF139Q8WU17 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF139Q8WU17 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF139Q8WU17 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RNF139Q8WU17 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF139Q8WU17 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF139Q8WU17 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF139Q8WU17 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RNF139Q8WU17 MIR663A-201ENST00000385250 93 ntBASIC21.77■■□□□ 1.08
RNF139Q8WU17 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.77■■□□□ 1.08
RNF139Q8WU17 CROCCP5-201ENST00000436658 830 ntBASIC21.77■■□□□ 1.08
RNF139Q8WU17 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF139Q8WU17 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF139Q8WU17 AC007322.4-201ENST00000509611 723 ntBASIC21.77■■□□□ 1.08
RNF139Q8WU17 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF139Q8WU17 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF139Q8WU17 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RNF139Q8WU17 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF139Q8WU17 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF139Q8WU17 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF139Q8WU17 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
RNF139Q8WU17 AL137060.1-201ENST00000618151 2648 ntBASIC21.76■■□□□ 1.07
RNF139Q8WU17 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF139Q8WU17 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF139Q8WU17 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF139Q8WU17 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF139Q8WU17 AL024507.2-201ENST00000606070 2574 ntBASIC21.76■■□□□ 1.07
RNF139Q8WU17 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF139Q8WU17 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF139Q8WU17 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF139Q8WU17 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RNF139Q8WU17 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF139Q8WU17 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF139Q8WU17 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF139Q8WU17 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF139Q8WU17 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RNF139Q8WU17 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF139Q8WU17 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RNF139Q8WU17 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF139Q8WU17 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF139Q8WU17 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF139Q8WU17 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF139Q8WU17 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF139Q8WU17 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
RNF139Q8WU17 AF106564.1-201ENST00000607058 2553 ntBASIC21.75■■□□□ 1.07
RNF139Q8WU17 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RNF139Q8WU17 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF139Q8WU17 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF139Q8WU17 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RNF139Q8WU17 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RNF139Q8WU17 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.74■■□□□ 1.07
RNF139Q8WU17 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF139Q8WU17 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
RNF139Q8WU17 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.74■■□□□ 1.07
RNF139Q8WU17 AL591742.1-201ENST00000604433 565 ntBASIC21.74■■□□□ 1.07
RNF139Q8WU17 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.74■■□□□ 1.07
RNF139Q8WU17 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF139Q8WU17 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF139Q8WU17 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RNF139Q8WU17 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF139Q8WU17 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RNF139Q8WU17 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF139Q8WU17 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF139Q8WU17 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF139Q8WU17 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF139Q8WU17 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF139Q8WU17 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF139Q8WU17 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF139Q8WU17 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF139Q8WU17 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF139Q8WU17 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF139Q8WU17 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF139Q8WU17 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF139Q8WU17 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF139Q8WU17 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF139Q8WU17 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.73■■□□□ 1.07
RNF139Q8WU17 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF139Q8WU17 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF139Q8WU17 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF139Q8WU17 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF139Q8WU17 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RNF139Q8WU17 AC005229.4-201ENST00000610085 2198 ntBASIC21.72■■□□□ 1.07
RNF139Q8WU17 AC068338.2-201ENST00000563278 1430 ntBASIC21.72■■□□□ 1.07
RNF139Q8WU17 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF139Q8WU17 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
RNF139Q8WU17 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF139Q8WU17 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF139Q8WU17 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF139Q8WU17 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF139Q8WU17 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF139Q8WU17 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF139Q8WU17 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RNF139Q8WU17 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF139Q8WU17 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RNF139Q8WU17 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF139Q8WU17 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms