Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RPS4Y2Q8TD47 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RPS4Y2Q8TD47 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.14■□□□□ 0.5
RPS4Y2Q8TD47 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.14■□□□□ 0.5
RPS4Y2Q8TD47 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.14■□□□□ 0.5
RPS4Y2Q8TD47 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
RPS4Y2Q8TD47 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 AC096631.2-201ENST00000436136 790 ntBASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 AL139246.5-201ENST00000606645 996 ntBASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4Y2Q8TD47 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4Y2Q8TD47 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 MIR4767-201ENST00000582827 78 ntBASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 AC233992.3-201ENST00000607491 485 ntBASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4Y2Q8TD47 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4Y2Q8TD47 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms