Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 AC009299.2-201ENST00000482477 511 ntBASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC71LQ8N9Z2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.21■□□□□ 0.34
CCDC71LQ8N9Z2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
CCDC71LQ8N9Z2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC71LQ8N9Z2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC71LQ8N9Z2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CCDC71LQ8N9Z2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
CCDC71LQ8N9Z2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC71LQ8N9Z2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC71LQ8N9Z2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 AL138724.1-201ENST00000606771 1088 ntBASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71LQ8N9Z2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms