Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.64■□□□□ 0.74
ARHGEF39Q8N4T4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ARHGEF39Q8N4T4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.64■□□□□ 0.73
ARHGEF39Q8N4T4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.64■□□□□ 0.73
ARHGEF39Q8N4T4 AL049796.1-201ENST00000565336 1766 ntBASIC19.64■□□□□ 0.73
ARHGEF39Q8N4T4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ARHGEF39Q8N4T4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ARHGEF39Q8N4T4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ARHGEF39Q8N4T4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ARHGEF39Q8N4T4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ARHGEF39Q8N4T4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 AC105036.2-201ENST00000569468 176 ntBASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 AC069236.1-201ENST00000604339 616 ntBASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 AL109923.1-201ENST00000618799 583 ntBASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ARHGEF39Q8N4T4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 AC142086.2-201ENST00000569753 217 ntBASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 AC116050.2-201ENST00000612102 1779 ntBASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARHGEF39Q8N4T4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 AC007322.3-201ENST00000426526 701 ntBASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 CDV3P1-201ENST00000471403 739 ntBASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARHGEF39Q8N4T4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 AC010980.2-201ENST00000587099 1412 ntBASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARHGEF39Q8N4T4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARHGEF39Q8N4T4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.59■□□□□ 0.73
ARHGEF39Q8N4T4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARHGEF39Q8N4T4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ARHGEF39Q8N4T4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ARHGEF39Q8N4T4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.59■□□□□ 0.73
ARHGEF39Q8N4T4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.59■□□□□ 0.73
ARHGEF39Q8N4T4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms