Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPAS4Q8IUM7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
NPAS4Q8IUM7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 AC116050.2-201ENST00000612102 1779 ntBASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPAS4Q8IUM7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 AC233263.1-201ENST00000578059 224 ntBASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 AC069544.1-201ENST00000609399 999 ntBASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NPAS4Q8IUM7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPAS4Q8IUM7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPAS4Q8IUM7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPAS4Q8IUM7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.33■■□□□ 1.17
NPAS4Q8IUM7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NPAS4Q8IUM7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPAS4Q8IUM7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPAS4Q8IUM7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NPAS4Q8IUM7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NPAS4Q8IUM7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.33■■□□□ 1.17
NPAS4Q8IUM7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NPAS4Q8IUM7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NPAS4Q8IUM7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NPAS4Q8IUM7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
NPAS4Q8IUM7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
NPAS4Q8IUM7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NPAS4Q8IUM7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
NPAS4Q8IUM7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.33■■□□□ 1.16
NPAS4Q8IUM7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NPAS4Q8IUM7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPAS4Q8IUM7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 POM121L13P-201ENST00000422362 380 ntBASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms