Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PACS1Q6VY07 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PACS1Q6VY07 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PACS1Q6VY07 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PACS1Q6VY07 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PACS1Q6VY07 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PACS1Q6VY07 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PACS1Q6VY07 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PACS1Q6VY07 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PACS1Q6VY07 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PACS1Q6VY07 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.91■□□□□ 0.94
PACS1Q6VY07 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.91■□□□□ 0.94
PACS1Q6VY07 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.91■□□□□ 0.94
PACS1Q6VY07 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.91■□□□□ 0.94
PACS1Q6VY07 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PACS1Q6VY07 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PACS1Q6VY07 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.91■□□□□ 0.94
PACS1Q6VY07 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PACS1Q6VY07 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PACS1Q6VY07 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PACS1Q6VY07 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PACS1Q6VY07 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PACS1Q6VY07 AP005212.1-201ENST00000581547 1997 ntBASIC20.9■□□□□ 0.94
PACS1Q6VY07 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PACS1Q6VY07 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.9■□□□□ 0.94
PACS1Q6VY07 AC121338.2-201ENST00000622535 1744 ntBASIC20.9■□□□□ 0.94
PACS1Q6VY07 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PACS1Q6VY07 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PACS1Q6VY07 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.9■□□□□ 0.94
PACS1Q6VY07 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PACS1Q6VY07 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
PACS1Q6VY07 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PACS1Q6VY07 GABARAPL3-202ENST00000624044 1851 ntBASIC20.9■□□□□ 0.94
PACS1Q6VY07 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.9■□□□□ 0.94
PACS1Q6VY07 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PACS1Q6VY07 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PACS1Q6VY07 AC073314.1-201ENST00000568729 2216 ntBASIC20.89■□□□□ 0.94
PACS1Q6VY07 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PACS1Q6VY07 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PACS1Q6VY07 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PACS1Q6VY07 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.89■□□□□ 0.93
PACS1Q6VY07 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PACS1Q6VY07 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
PACS1Q6VY07 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PACS1Q6VY07 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.88■□□□□ 0.93
PACS1Q6VY07 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.88■□□□□ 0.93
PACS1Q6VY07 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.88■□□□□ 0.93
PACS1Q6VY07 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.88■□□□□ 0.93
PACS1Q6VY07 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PACS1Q6VY07 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 AC026271.2-201ENST00000428091 497 ntBASIC20.87■□□□□ 0.93
PACS1Q6VY07 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 DUX4L2-201ENST00000561772 1275 ntBASIC20.87■□□□□ 0.93
PACS1Q6VY07 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 DUX4L6-201ENST00000626483 1275 ntBASIC20.87■□□□□ 0.93
PACS1Q6VY07 DUX4L1-201ENST00000627662 1275 ntBASIC20.87■□□□□ 0.93
PACS1Q6VY07 DUX4L8-201ENST00000629013 1275 ntBASIC20.87■□□□□ 0.93
PACS1Q6VY07 DUX4L3-201ENST00000630187 1275 ntBASIC20.87■□□□□ 0.93
PACS1Q6VY07 DUX4L7-201ENST00000630678 1275 ntBASIC20.87■□□□□ 0.93
PACS1Q6VY07 DUX4L5-201ENST00000630834 1275 ntBASIC20.87■□□□□ 0.93
PACS1Q6VY07 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PACS1Q6VY07 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PACS1Q6VY07 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms