Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 BX842568.3-201ENST00000418104 571 ntBASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 AC010525.1-201ENST00000585559 441 ntBASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 AL136967.2-201ENST00000623968 743 ntBASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R4Q6NUP7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 RASA4CP-201ENST00000424092 1398 ntBASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.78■□□□□ 0.76
PPP4R4Q6NUP7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
PPP4R4Q6NUP7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PPP4R4Q6NUP7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PPP4R4Q6NUP7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R4Q6NUP7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 AC079089.2-201ENST00000531211 1277 ntBASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP4R4Q6NUP7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms