Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GFI1BQ5VTD9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.14■□□□□ 0.18
GFI1BQ5VTD9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.14■□□□□ 0.18
GFI1BQ5VTD9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
GFI1BQ5VTD9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 AP005212.1-201ENST00000581547 1997 ntBASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GFI1BQ5VTD9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 MIR3621-201ENST00000580529 85 ntBASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.13■□□□□ 0.17
GFI1BQ5VTD9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 AC116562.4-201ENST00000641316 2276 ntBASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 AC006455.2-201ENST00000429931 906 ntBASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GFI1BQ5VTD9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 AC073314.1-201ENST00000568729 2216 ntBASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GFI1BQ5VTD9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms