Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUBP1P53384 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUBP1P53384 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUBP1P53384 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.81■□□□□ 0.92
NUBP1P53384 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.81■□□□□ 0.92
NUBP1P53384 AC087388.1-201ENST00000571370 1112 ntBASIC20.81■□□□□ 0.92
NUBP1P53384 NTF6B-201ENST00000591913 560 ntBASIC20.81■□□□□ 0.92
NUBP1P53384 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.81■□□□□ 0.92
NUBP1P53384 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUBP1P53384 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.81■□□□□ 0.92
NUBP1P53384 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NUBP1P53384 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NUBP1P53384 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.8■□□□□ 0.92
NUBP1P53384 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NUBP1P53384 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUBP1P53384 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUBP1P53384 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.8■□□□□ 0.92
NUBP1P53384 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUBP1P53384 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUBP1P53384 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUBP1P53384 TPM4P1-201ENST00000436100 807 ntBASIC20.8■□□□□ 0.92
NUBP1P53384 DUX4L26-201ENST00000489078 1255 ntBASIC20.8■□□□□ 0.92
NUBP1P53384 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.8■□□□□ 0.92
NUBP1P53384 AC005829.2-201ENST00000571422 1056 ntBASIC20.8■□□□□ 0.92
NUBP1P53384 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NUBP1P53384 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUBP1P53384 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUBP1P53384 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NUBP1P53384 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUBP1P53384 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUBP1P53384 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUBP1P53384 AC073508.3-201ENST00000619697 1419 ntBASIC20.79■□□□□ 0.92
NUBP1P53384 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUBP1P53384 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUBP1P53384 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUBP1P53384 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUBP1P53384 TERF1P1-201ENST00000311003 1181 ntBASIC20.79■□□□□ 0.92
NUBP1P53384 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.79■□□□□ 0.92
NUBP1P53384 AC007322.3-201ENST00000426526 701 ntBASIC20.79■□□□□ 0.92
NUBP1P53384 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
NUBP1P53384 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC20.79■□□□□ 0.92
NUBP1P53384 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.79■□□□□ 0.92
NUBP1P53384 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NUBP1P53384 AF186192.3-201ENST00000583427 947 ntBASIC20.79■□□□□ 0.92
NUBP1P53384 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.79■□□□□ 0.92
NUBP1P53384 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.79■□□□□ 0.92
NUBP1P53384 LINC01568-207ENST00000641790 1380 ntBASIC20.79■□□□□ 0.92
NUBP1P53384 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NUBP1P53384 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUBP1P53384 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUBP1P53384 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUBP1P53384 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUBP1P53384 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.78■□□□□ 0.92
NUBP1P53384 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.78■□□□□ 0.92
NUBP1P53384 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUBP1P53384 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUBP1P53384 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUBP1P53384 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUBP1P53384 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.78■□□□□ 0.92
NUBP1P53384 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUBP1P53384 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUBP1P53384 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUBP1P53384 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.78■□□□□ 0.92
NUBP1P53384 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.78■□□□□ 0.92
NUBP1P53384 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.78■□□□□ 0.92
NUBP1P53384 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.78■□□□□ 0.92
NUBP1P53384 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.78■□□□□ 0.92
NUBP1P53384 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.78■□□□□ 0.92
NUBP1P53384 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.78■□□□□ 0.92
NUBP1P53384 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.78■□□□□ 0.92
NUBP1P53384 AC022726.2-201ENST00000634673 547 ntBASIC20.78■□□□□ 0.92
NUBP1P53384 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUBP1P53384 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUBP1P53384 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUBP1P53384 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUBP1P53384 CYP21A1P-202ENST00000354927 1481 ntBASIC20.77■□□□□ 0.92
NUBP1P53384 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUBP1P53384 UNC93B2-201ENST00000285383 730 ntBASIC20.77■□□□□ 0.92
NUBP1P53384 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUBP1P53384 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUBP1P53384 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NUBP1P53384 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NUBP1P53384 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.77■□□□□ 0.92
NUBP1P53384 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.77■□□□□ 0.92
NUBP1P53384 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NUBP1P53384 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.77■□□□□ 0.92
NUBP1P53384 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.77■□□□□ 0.91
NUBP1P53384 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUBP1P53384 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.76■□□□□ 0.91
NUBP1P53384 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.76■□□□□ 0.91
NUBP1P53384 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.76■□□□□ 0.91
NUBP1P53384 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUBP1P53384 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUBP1P53384 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.76■□□□□ 0.91
NUBP1P53384 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.76■□□□□ 0.91
NUBP1P53384 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.76■□□□□ 0.91
NUBP1P53384 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUBP1P53384 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.75■□□□□ 0.91
NUBP1P53384 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUBP1P53384 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms